Protein–RNA interactions for Protein: Q8BIF2

Rbfox3, RNA binding protein fox-1 homolog 3, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox3Q8BIF2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rbfox3Q8BIF2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rbfox3Q8BIF2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rbfox3Q8BIF2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rbfox3Q8BIF2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
Rbfox3Q8BIF2 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rbfox3Q8BIF2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rbfox3Q8BIF2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rbfox3Q8BIF2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rbfox3Q8BIF2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Rbfox3Q8BIF2 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rbfox3Q8BIF2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rbfox3Q8BIF2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rbfox3Q8BIF2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rbfox3Q8BIF2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rbfox3Q8BIF2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rbfox3Q8BIF2 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rbfox3Q8BIF2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rbfox3Q8BIF2 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Rbfox3Q8BIF2 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rbfox3Q8BIF2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rbfox3Q8BIF2 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rbfox3Q8BIF2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rbfox3Q8BIF2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rbfox3Q8BIF2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.46■□□□□ 0.39
Rbfox3Q8BIF2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rbfox3Q8BIF2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rbfox3Q8BIF2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.45■□□□□ 0.38
Rbfox3Q8BIF2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rbfox3Q8BIF2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Rbfox3Q8BIF2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rbfox3Q8BIF2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Rbfox3Q8BIF2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rbfox3Q8BIF2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.44■□□□□ 0.38
Rbfox3Q8BIF2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.44■□□□□ 0.38
Rbfox3Q8BIF2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rbfox3Q8BIF2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Rbfox3Q8BIF2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Rbfox3Q8BIF2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rbfox3Q8BIF2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rbfox3Q8BIF2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rbfox3Q8BIF2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rbfox3Q8BIF2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rbfox3Q8BIF2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
Rbfox3Q8BIF2 Gm7432-201ENSMUST00000210343 879 ntBASIC17.42■□□□□ 0.38
Rbfox3Q8BIF2 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rbfox3Q8BIF2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.41■□□□□ 0.38
Rbfox3Q8BIF2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.41■□□□□ 0.38
Rbfox3Q8BIF2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rbfox3Q8BIF2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rbfox3Q8BIF2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rbfox3Q8BIF2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rbfox3Q8BIF2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rbfox3Q8BIF2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rbfox3Q8BIF2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rbfox3Q8BIF2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rbfox3Q8BIF2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rbfox3Q8BIF2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rbfox3Q8BIF2 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rbfox3Q8BIF2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rbfox3Q8BIF2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rbfox3Q8BIF2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rbfox3Q8BIF2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
Rbfox3Q8BIF2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rbfox3Q8BIF2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rbfox3Q8BIF2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rbfox3Q8BIF2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Rbfox3Q8BIF2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rbfox3Q8BIF2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.37■□□□□ 0.37
Rbfox3Q8BIF2 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rbfox3Q8BIF2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rbfox3Q8BIF2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rbfox3Q8BIF2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rbfox3Q8BIF2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.36■□□□□ 0.37
Rbfox3Q8BIF2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rbfox3Q8BIF2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rbfox3Q8BIF2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rbfox3Q8BIF2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC17.35■□□□□ 0.37
Rbfox3Q8BIF2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rbfox3Q8BIF2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rbfox3Q8BIF2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Rbfox3Q8BIF2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rbfox3Q8BIF2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rbfox3Q8BIF2 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rbfox3Q8BIF2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rbfox3Q8BIF2 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rbfox3Q8BIF2 Gm11599-201ENSMUST00000118720 878 ntBASIC17.34■□□□□ 0.37
Rbfox3Q8BIF2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rbfox3Q8BIF2 Gm37136-201ENSMUST00000194368 194 ntBASIC17.34■□□□□ 0.37
Rbfox3Q8BIF2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rbfox3Q8BIF2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rbfox3Q8BIF2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rbfox3Q8BIF2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.33■□□□□ 0.36
Rbfox3Q8BIF2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rbfox3Q8BIF2 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rbfox3Q8BIF2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rbfox3Q8BIF2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rbfox3Q8BIF2 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rbfox3Q8BIF2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rbfox3Q8BIF2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms