Protein–RNA interactions for Protein: Q6PGA0

Rcor3, REST corepressor 3, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcor3Q6PGA0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rcor3Q6PGA0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Rcor3Q6PGA0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rcor3Q6PGA0 Gm7332-201ENSMUST00000118351 454 ntBASIC21.41■■□□□ 1.02
Rcor3Q6PGA0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.41■■□□□ 1.02
Rcor3Q6PGA0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rcor3Q6PGA0 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.41■■□□□ 1.02
Rcor3Q6PGA0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rcor3Q6PGA0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rcor3Q6PGA0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rcor3Q6PGA0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Rcor3Q6PGA0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rcor3Q6PGA0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Rcor3Q6PGA0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.39■■□□□ 1.01
Rcor3Q6PGA0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.39■■□□□ 1.01
Rcor3Q6PGA0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rcor3Q6PGA0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rcor3Q6PGA0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rcor3Q6PGA0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rcor3Q6PGA0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rcor3Q6PGA0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.38■■□□□ 1.01
Rcor3Q6PGA0 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rcor3Q6PGA0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rcor3Q6PGA0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Rcor3Q6PGA0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.37■■□□□ 1.01
Rcor3Q6PGA0 Gm37136-201ENSMUST00000194368 194 ntBASIC21.37■■□□□ 1.01
Rcor3Q6PGA0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rcor3Q6PGA0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Rcor3Q6PGA0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rcor3Q6PGA0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rcor3Q6PGA0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.36■■□□□ 1.01
Rcor3Q6PGA0 Gm27502-201ENSMUST00000183495 199 ntBASIC21.36■■□□□ 1.01
Rcor3Q6PGA0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
Rcor3Q6PGA0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rcor3Q6PGA0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Rcor3Q6PGA0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Rcor3Q6PGA0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rcor3Q6PGA0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rcor3Q6PGA0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rcor3Q6PGA0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rcor3Q6PGA0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rcor3Q6PGA0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rcor3Q6PGA0 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.34■■□□□ 1.01
Rcor3Q6PGA0 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rcor3Q6PGA0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.33■■□□□ 1.01
Rcor3Q6PGA0 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rcor3Q6PGA0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rcor3Q6PGA0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Rcor3Q6PGA0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rcor3Q6PGA0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.32■■□□□ 1
Rcor3Q6PGA0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
Rcor3Q6PGA0 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.3■■□□□ 1
Rcor3Q6PGA0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.3■■□□□ 1
Rcor3Q6PGA0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Rcor3Q6PGA0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.3■■□□□ 1
Rcor3Q6PGA0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rcor3Q6PGA0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.3■■□□□ 1
Rcor3Q6PGA0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rcor3Q6PGA0 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.3■■□□□ 1
Rcor3Q6PGA0 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Rcor3Q6PGA0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rcor3Q6PGA0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Rcor3Q6PGA0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rcor3Q6PGA0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.28■■□□□ 1
Rcor3Q6PGA0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.28■■□□□ 1
Rcor3Q6PGA0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.27■■□□□ 1
Rcor3Q6PGA0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rcor3Q6PGA0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rcor3Q6PGA0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
Rcor3Q6PGA0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rcor3Q6PGA0 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.26■□□□□ 0.99
Rcor3Q6PGA0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rcor3Q6PGA0 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rcor3Q6PGA0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rcor3Q6PGA0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.25■□□□□ 0.99
Rcor3Q6PGA0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rcor3Q6PGA0 Gm14523-201ENSMUST00000117260 558 ntBASIC21.25■□□□□ 0.99
Rcor3Q6PGA0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rcor3Q6PGA0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Rcor3Q6PGA0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rcor3Q6PGA0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rcor3Q6PGA0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rcor3Q6PGA0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rcor3Q6PGA0 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rcor3Q6PGA0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.22■□□□□ 0.99
Rcor3Q6PGA0 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rcor3Q6PGA0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rcor3Q6PGA0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.21■□□□□ 0.99
Rcor3Q6PGA0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rcor3Q6PGA0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.21■□□□□ 0.99
Rcor3Q6PGA0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
Rcor3Q6PGA0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Rcor3Q6PGA0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.21■□□□□ 0.99
Rcor3Q6PGA0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rcor3Q6PGA0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rcor3Q6PGA0 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Rcor3Q6PGA0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rcor3Q6PGA0 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rcor3Q6PGA0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rcor3Q6PGA0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms