Protein–RNA interactions for Protein: Q684R7

Frem1, FRAS1-related extracellular matrix protein 1, mousemouse

Predictions only

Length 2,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frem1Q684R7 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Frem1Q684R7 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.25■□□□□ 0.83
Frem1Q684R7 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Frem1Q684R7 Gm27502-201ENSMUST00000183495 199 ntBASIC20.24■□□□□ 0.83
Frem1Q684R7 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Frem1Q684R7 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.24■□□□□ 0.83
Frem1Q684R7 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Frem1Q684R7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Frem1Q684R7 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.23■□□□□ 0.83
Frem1Q684R7 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Frem1Q684R7 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.23■□□□□ 0.83
Frem1Q684R7 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Frem1Q684R7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Frem1Q684R7 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.22■□□□□ 0.83
Frem1Q684R7 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Frem1Q684R7 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Frem1Q684R7 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Frem1Q684R7 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Frem1Q684R7 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.19■□□□□ 0.82
Frem1Q684R7 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Frem1Q684R7 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Frem1Q684R7 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Frem1Q684R7 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Frem1Q684R7 Gm14523-201ENSMUST00000117260 558 ntBASIC20.18■□□□□ 0.82
Frem1Q684R7 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Frem1Q684R7 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.18■□□□□ 0.82
Frem1Q684R7 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Frem1Q684R7 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Frem1Q684R7 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Frem1Q684R7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Frem1Q684R7 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Frem1Q684R7 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Frem1Q684R7 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Frem1Q684R7 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Frem1Q684R7 Terc-201ENSMUST00000082862 423 ntBASIC20.16■□□□□ 0.82
Frem1Q684R7 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Frem1Q684R7 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Frem1Q684R7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Frem1Q684R7 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Frem1Q684R7 Gm10420-201ENSMUST00000121713 882 ntBASIC20.14■□□□□ 0.81
Frem1Q684R7 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.14■□□□□ 0.81
Frem1Q684R7 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Frem1Q684R7 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Frem1Q684R7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Frem1Q684R7 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.12■□□□□ 0.81
Frem1Q684R7 Gm5812-201ENSMUST00000061073 957 ntBASIC20.12■□□□□ 0.81
Frem1Q684R7 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Frem1Q684R7 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Frem1Q684R7 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.12■□□□□ 0.81
Frem1Q684R7 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Frem1Q684R7 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Frem1Q684R7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Frem1Q684R7 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Frem1Q684R7 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Frem1Q684R7 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Frem1Q684R7 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Frem1Q684R7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.1■□□□□ 0.81
Frem1Q684R7 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.1■□□□□ 0.81
Frem1Q684R7 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Frem1Q684R7 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Frem1Q684R7 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.09■□□□□ 0.81
Frem1Q684R7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Frem1Q684R7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Frem1Q684R7 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Frem1Q684R7 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Frem1Q684R7 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Frem1Q684R7 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.08■□□□□ 0.8
Frem1Q684R7 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
Frem1Q684R7 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Frem1Q684R7 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Frem1Q684R7 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Frem1Q684R7 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Frem1Q684R7 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Frem1Q684R7 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.06■□□□□ 0.8
Frem1Q684R7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Frem1Q684R7 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Frem1Q684R7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Frem1Q684R7 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.05■□□□□ 0.8
Frem1Q684R7 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.05■□□□□ 0.8
Frem1Q684R7 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.05■□□□□ 0.8
Frem1Q684R7 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Frem1Q684R7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Frem1Q684R7 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Frem1Q684R7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Frem1Q684R7 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.04■□□□□ 0.8
Frem1Q684R7 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.04■□□□□ 0.8
Frem1Q684R7 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Frem1Q684R7 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.04■□□□□ 0.8
Frem1Q684R7 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.04■□□□□ 0.8
Frem1Q684R7 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Frem1Q684R7 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Frem1Q684R7 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Frem1Q684R7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Frem1Q684R7 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Frem1Q684R7 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.02■□□□□ 0.79
Frem1Q684R7 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Frem1Q684R7 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Frem1Q684R7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Frem1Q684R7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Frem1Q684R7 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms