Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC29.15■■■□□ 2.26
Col11a2Q64739 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
Col11a2Q64739 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
Col11a2Q64739 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Col11a2Q64739 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Col11a2Q64739 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC29.13■■■□□ 2.25
Col11a2Q64739 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Col11a2Q64739 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Col11a2Q64739 Gm15546-201ENSMUST00000122095 826 ntBASIC29.11■■■□□ 2.25
Col11a2Q64739 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC29.11■■■□□ 2.25
Col11a2Q64739 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Col11a2Q64739 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC29.1■■■□□ 2.25
Col11a2Q64739 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Col11a2Q64739 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC29.09■■■□□ 2.25
Col11a2Q64739 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Col11a2Q64739 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
Col11a2Q64739 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Col11a2Q64739 AC153911.1-201ENSMUST00000220378 758 ntBASIC29.08■■■□□ 2.25
Col11a2Q64739 Terc-201ENSMUST00000082862 423 ntBASIC29.08■■■□□ 2.25
Col11a2Q64739 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Col11a2Q64739 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC29.07■■■□□ 2.24
Col11a2Q64739 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Col11a2Q64739 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Col11a2Q64739 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Col11a2Q64739 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Col11a2Q64739 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Col11a2Q64739 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC29.04■■■□□ 2.24
Col11a2Q64739 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Col11a2Q64739 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC29.04■■■□□ 2.24
Col11a2Q64739 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC29.03■■■□□ 2.24
Col11a2Q64739 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
Col11a2Q64739 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Col11a2Q64739 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC29.03■■■□□ 2.24
Col11a2Q64739 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC29.02■■■□□ 2.24
Col11a2Q64739 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC29.02■■■□□ 2.24
Col11a2Q64739 Gm14121-201ENSMUST00000121441 1380 ntBASIC29.01■■■□□ 2.23
Col11a2Q64739 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC29■■■□□ 2.23
Col11a2Q64739 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Col11a2Q64739 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC29■■■□□ 2.23
Col11a2Q64739 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC28.99■■■□□ 2.23
Col11a2Q64739 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Col11a2Q64739 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC28.99■■■□□ 2.23
Col11a2Q64739 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
Col11a2Q64739 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC28.99■■■□□ 2.23
Col11a2Q64739 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC28.99■■■□□ 2.23
Col11a2Q64739 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Col11a2Q64739 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Col11a2Q64739 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Col11a2Q64739 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC28.97■■■□□ 2.23
Col11a2Q64739 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC28.97■■■□□ 2.23
Col11a2Q64739 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Col11a2Q64739 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC28.96■■■□□ 2.23
Col11a2Q64739 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Col11a2Q64739 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Col11a2Q64739 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
Col11a2Q64739 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC28.95■■■□□ 2.23
Col11a2Q64739 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
Col11a2Q64739 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
Col11a2Q64739 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC28.95■■■□□ 2.22
Col11a2Q64739 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Col11a2Q64739 AC093043.1-201ENSMUST00000226700 898 ntBASIC28.94■■■□□ 2.22
Col11a2Q64739 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Col11a2Q64739 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
Col11a2Q64739 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Col11a2Q64739 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC28.91■■■□□ 2.22
Col11a2Q64739 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC28.91■■■□□ 2.22
Col11a2Q64739 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Col11a2Q64739 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC28.91■■■□□ 2.22
Col11a2Q64739 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Col11a2Q64739 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Col11a2Q64739 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Col11a2Q64739 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Col11a2Q64739 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC28.9■■■□□ 2.22
Col11a2Q64739 Gm43566-201ENSMUST00000196851 808 ntBASIC28.9■■■□□ 2.22
Col11a2Q64739 Gm15820-201ENSMUST00000201566 728 ntBASIC28.9■■■□□ 2.22
Col11a2Q64739 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC28.9■■■□□ 2.22
Col11a2Q64739 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Col11a2Q64739 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Col11a2Q64739 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Col11a2Q64739 Gm13238-201ENSMUST00000117655 780 ntBASIC28.88■■■□□ 2.21
Col11a2Q64739 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Col11a2Q64739 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC28.88■■■□□ 2.21
Col11a2Q64739 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC28.87■■■□□ 2.21
Col11a2Q64739 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Col11a2Q64739 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Col11a2Q64739 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC28.87■■■□□ 2.21
Col11a2Q64739 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Col11a2Q64739 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC28.87■■■□□ 2.21
Col11a2Q64739 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC28.86■■■□□ 2.21
Col11a2Q64739 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC28.86■■■□□ 2.21
Col11a2Q64739 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC28.85■■■□□ 2.21
Col11a2Q64739 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Col11a2Q64739 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
Col11a2Q64739 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC28.84■■■□□ 2.21
Col11a2Q64739 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Col11a2Q64739 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Col11a2Q64739 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Col11a2Q64739 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Col11a2Q64739 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Col11a2Q64739 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC28.83■■■□□ 2.21
Retrieved 100 of 76,532 protein–RNA pairs in 151.4 ms