Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Gm37847-201ENSMUST00000192163 1497 ntBASIC30.63■■■□□ 2.49
Ccne1Q61457 Gm31748-201ENSMUST00000194938 1497 ntBASIC30.63■■■□□ 2.49
Ccne1Q61457 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Ccne1Q61457 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Ccne1Q61457 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Ccne1Q61457 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Ccne1Q61457 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Ccne1Q61457 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Ccne1Q61457 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC30.6■■■□□ 2.49
Ccne1Q61457 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC30.6■■■□□ 2.49
Ccne1Q61457 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC30.59■■■□□ 2.49
Ccne1Q61457 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Ccne1Q61457 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
Ccne1Q61457 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Ccne1Q61457 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC30.58■■■□□ 2.49
Ccne1Q61457 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Ccne1Q61457 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Ccne1Q61457 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Ccne1Q61457 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
Ccne1Q61457 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Ccne1Q61457 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC30.57■■■□□ 2.48
Ccne1Q61457 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC30.56■■■□□ 2.48
Ccne1Q61457 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Ccne1Q61457 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Ccne1Q61457 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Ccne1Q61457 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC30.55■■■□□ 2.48
Ccne1Q61457 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Ccne1Q61457 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Ccne1Q61457 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC30.54■■■□□ 2.48
Ccne1Q61457 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Ccne1Q61457 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC30.52■■■□□ 2.48
Ccne1Q61457 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC30.51■■■□□ 2.48
Ccne1Q61457 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Ccne1Q61457 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Ccne1Q61457 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Ccne1Q61457 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC30.5■■■□□ 2.47
Ccne1Q61457 AC153911.1-201ENSMUST00000220378 758 ntBASIC30.5■■■□□ 2.47
Ccne1Q61457 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
Ccne1Q61457 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Ccne1Q61457 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Ccne1Q61457 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC30.49■■■□□ 2.47
Ccne1Q61457 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
Ccne1Q61457 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC30.48■■■□□ 2.47
Ccne1Q61457 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC30.48■■■□□ 2.47
Ccne1Q61457 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
Ccne1Q61457 Terc-201ENSMUST00000082862 423 ntBASIC30.48■■■□□ 2.47
Ccne1Q61457 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Ccne1Q61457 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
Ccne1Q61457 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC30.47■■■□□ 2.47
Ccne1Q61457 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC30.46■■■□□ 2.47
Ccne1Q61457 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Ccne1Q61457 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC30.45■■■□□ 2.47
Ccne1Q61457 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Ccne1Q61457 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC30.45■■■□□ 2.46
Ccne1Q61457 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC30.45■■■□□ 2.46
Ccne1Q61457 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Ccne1Q61457 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Ccne1Q61457 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Ccne1Q61457 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Ccne1Q61457 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Ccne1Q61457 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Ccne1Q61457 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Ccne1Q61457 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC30.41■■■□□ 2.46
Ccne1Q61457 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Ccne1Q61457 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Ccne1Q61457 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC30.41■■■□□ 2.46
Ccne1Q61457 Gm5067-201ENSMUST00000170449 1009 ntBASIC30.4■■■□□ 2.46
Ccne1Q61457 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Ccne1Q61457 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.46
Ccne1Q61457 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Ccne1Q61457 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Ccne1Q61457 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Ccne1Q61457 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Ccne1Q61457 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ccne1Q61457 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Ccne1Q61457 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC30.36■■■□□ 2.45
Ccne1Q61457 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ccne1Q61457 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ccne1Q61457 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Ccne1Q61457 Gm10420-201ENSMUST00000121713 882 ntBASIC30.35■■■□□ 2.45
Ccne1Q61457 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
Ccne1Q61457 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Ccne1Q61457 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
Ccne1Q61457 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Ccne1Q61457 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Ccne1Q61457 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC30.31■■■□□ 2.44
Ccne1Q61457 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC30.31■■■□□ 2.44
Ccne1Q61457 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
Ccne1Q61457 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC30.29■■■□□ 2.44
Ccne1Q61457 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC30.28■■■□□ 2.44
Ccne1Q61457 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
Ccne1Q61457 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
Ccne1Q61457 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC30.26■■■□□ 2.43
Ccne1Q61457 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Ccne1Q61457 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Ccne1Q61457 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Ccne1Q61457 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Ccne1Q61457 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Ccne1Q61457 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Ccne1Q61457 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Retrieved 100 of 76,532 protein–RNA pairs in 1040.3 ms