Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Clcn4Q61418 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21■□□□□ 0.95
Clcn4Q61418 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clcn4Q61418 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clcn4Q61418 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clcn4Q61418 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Clcn4Q61418 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clcn4Q61418 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clcn4Q61418 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Clcn4Q61418 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Clcn4Q61418 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clcn4Q61418 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clcn4Q61418 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Clcn4Q61418 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
Clcn4Q61418 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clcn4Q61418 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clcn4Q61418 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Clcn4Q61418 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clcn4Q61418 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Clcn4Q61418 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clcn4Q61418 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clcn4Q61418 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clcn4Q61418 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Clcn4Q61418 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clcn4Q61418 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clcn4Q61418 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clcn4Q61418 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clcn4Q61418 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
Clcn4Q61418 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Clcn4Q61418 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Clcn4Q61418 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Clcn4Q61418 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clcn4Q61418 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.93■□□□□ 0.94
Clcn4Q61418 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clcn4Q61418 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clcn4Q61418 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clcn4Q61418 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Clcn4Q61418 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Clcn4Q61418 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn4Q61418 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Clcn4Q61418 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
Clcn4Q61418 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn4Q61418 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.9■□□□□ 0.94
Clcn4Q61418 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn4Q61418 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn4Q61418 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn4Q61418 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Clcn4Q61418 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.89■□□□□ 0.93
Clcn4Q61418 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clcn4Q61418 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.89■□□□□ 0.93
Clcn4Q61418 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Clcn4Q61418 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Clcn4Q61418 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clcn4Q61418 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clcn4Q61418 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clcn4Q61418 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn4Q61418 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.88■□□□□ 0.93
Clcn4Q61418 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn4Q61418 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn4Q61418 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clcn4Q61418 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Clcn4Q61418 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clcn4Q61418 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn4Q61418 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn4Q61418 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn4Q61418 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn4Q61418 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn4Q61418 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clcn4Q61418 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.84■□□□□ 0.93
Clcn4Q61418 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.84■□□□□ 0.93
Clcn4Q61418 Gm11599-201ENSMUST00000118720 878 ntBASIC20.84■□□□□ 0.93
Clcn4Q61418 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Clcn4Q61418 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.83■□□□□ 0.93
Clcn4Q61418 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clcn4Q61418 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clcn4Q61418 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.83■□□□□ 0.93
Clcn4Q61418 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.83■□□□□ 0.92
Clcn4Q61418 Particl-201ENSMUST00000205370 1560 ntBASIC20.82■□□□□ 0.92
Clcn4Q61418 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Clcn4Q61418 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clcn4Q61418 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clcn4Q61418 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clcn4Q61418 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clcn4Q61418 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.81■□□□□ 0.92
Clcn4Q61418 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Clcn4Q61418 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clcn4Q61418 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clcn4Q61418 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.8■□□□□ 0.92
Clcn4Q61418 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clcn4Q61418 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.79■□□□□ 0.92
Clcn4Q61418 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clcn4Q61418 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clcn4Q61418 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Clcn4Q61418 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Clcn4Q61418 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clcn4Q61418 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clcn4Q61418 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Clcn4Q61418 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.75■□□□□ 0.91
Clcn4Q61418 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.75■□□□□ 0.91
Clcn4Q61418 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 105.1 ms