Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Nhej1Q3KNJ2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Nhej1Q3KNJ2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Nhej1Q3KNJ2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Nhej1Q3KNJ2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.44■■□□□ 1.5
Nhej1Q3KNJ2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
Nhej1Q3KNJ2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
Nhej1Q3KNJ2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Nhej1Q3KNJ2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Nhej1Q3KNJ2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.43■■□□□ 1.5
Nhej1Q3KNJ2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Nhej1Q3KNJ2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Nhej1Q3KNJ2 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Nhej1Q3KNJ2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Nhej1Q3KNJ2 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Nhej1Q3KNJ2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Nhej1Q3KNJ2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Nhej1Q3KNJ2 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Nhej1Q3KNJ2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Nhej1Q3KNJ2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Nhej1Q3KNJ2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Nhej1Q3KNJ2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Nhej1Q3KNJ2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Nhej1Q3KNJ2 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
Nhej1Q3KNJ2 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Nhej1Q3KNJ2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Nhej1Q3KNJ2 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
Nhej1Q3KNJ2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Nhej1Q3KNJ2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Nhej1Q3KNJ2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Nhej1Q3KNJ2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Nhej1Q3KNJ2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Nhej1Q3KNJ2 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Nhej1Q3KNJ2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC24.37■■□□□ 1.49
Nhej1Q3KNJ2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Nhej1Q3KNJ2 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Nhej1Q3KNJ2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.36■■□□□ 1.49
Nhej1Q3KNJ2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Nhej1Q3KNJ2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Nhej1Q3KNJ2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC24.35■■□□□ 1.49
Nhej1Q3KNJ2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Nhej1Q3KNJ2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Nhej1Q3KNJ2 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Nhej1Q3KNJ2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC24.34■■□□□ 1.49
Nhej1Q3KNJ2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Nhej1Q3KNJ2 Gm4419-202ENSMUST00000226239 1431 ntBASIC24.34■■□□□ 1.49
Nhej1Q3KNJ2 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Nhej1Q3KNJ2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
Nhej1Q3KNJ2 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Nhej1Q3KNJ2 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
Nhej1Q3KNJ2 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Nhej1Q3KNJ2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Nhej1Q3KNJ2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Nhej1Q3KNJ2 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Nhej1Q3KNJ2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Nhej1Q3KNJ2 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC24.3■■□□□ 1.48
Nhej1Q3KNJ2 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Nhej1Q3KNJ2 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Nhej1Q3KNJ2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.29■■□□□ 1.48
Nhej1Q3KNJ2 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC24.29■■□□□ 1.48
Nhej1Q3KNJ2 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Nhej1Q3KNJ2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Nhej1Q3KNJ2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Nhej1Q3KNJ2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Nhej1Q3KNJ2 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Nhej1Q3KNJ2 Nkain2-201ENSMUST00000092602 558 ntBASIC24.28■■□□□ 1.48
Nhej1Q3KNJ2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Nhej1Q3KNJ2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.28■■□□□ 1.48
Nhej1Q3KNJ2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Nhej1Q3KNJ2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Nhej1Q3KNJ2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Nhej1Q3KNJ2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Nhej1Q3KNJ2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
Nhej1Q3KNJ2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Nhej1Q3KNJ2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Nhej1Q3KNJ2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC24.24■■□□□ 1.47
Nhej1Q3KNJ2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Nhej1Q3KNJ2 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Nhej1Q3KNJ2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.24■■□□□ 1.47
Nhej1Q3KNJ2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Nhej1Q3KNJ2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Nhej1Q3KNJ2 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Nhej1Q3KNJ2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24.23■■□□□ 1.47
Nhej1Q3KNJ2 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Nhej1Q3KNJ2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Nhej1Q3KNJ2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Nhej1Q3KNJ2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
Nhej1Q3KNJ2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Nhej1Q3KNJ2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Nhej1Q3KNJ2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
Nhej1Q3KNJ2 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Nhej1Q3KNJ2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Nhej1Q3KNJ2 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Nhej1Q3KNJ2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Nhej1Q3KNJ2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC24.21■■□□□ 1.47
Nhej1Q3KNJ2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
Nhej1Q3KNJ2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Nhej1Q3KNJ2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
Nhej1Q3KNJ2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
Nhej1Q3KNJ2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 353.3 ms