Protein–RNA interactions for Protein: P98083

Shc1, SHC-transforming protein 1, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc1P98083 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shc1P98083 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Shc1P98083 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shc1P98083 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shc1P98083 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.62■□□□□ 0.89
Shc1P98083 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shc1P98083 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.62■□□□□ 0.89
Shc1P98083 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shc1P98083 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Shc1P98083 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shc1P98083 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Shc1P98083 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shc1P98083 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Shc1P98083 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shc1P98083 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shc1P98083 Mir3960-201ENSMUST00000198213 73 ntBASIC20.59■□□□□ 0.89
Shc1P98083 Gm45364-201ENSMUST00000210883 159 ntBASIC20.59■□□□□ 0.89
Shc1P98083 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shc1P98083 Gm6311-201ENSMUST00000073790 878 ntBASIC20.59■□□□□ 0.89
Shc1P98083 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.59■□□□□ 0.89
Shc1P98083 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Shc1P98083 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Shc1P98083 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shc1P98083 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.57■□□□□ 0.88
Shc1P98083 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Shc1P98083 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.57■□□□□ 0.88
Shc1P98083 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Shc1P98083 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Shc1P98083 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shc1P98083 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shc1P98083 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Shc1P98083 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shc1P98083 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.56■□□□□ 0.88
Shc1P98083 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.56■□□□□ 0.88
Shc1P98083 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shc1P98083 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shc1P98083 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shc1P98083 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shc1P98083 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.55■□□□□ 0.88
Shc1P98083 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Shc1P98083 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.54■□□□□ 0.88
Shc1P98083 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Shc1P98083 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Shc1P98083 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.54■□□□□ 0.88
Shc1P98083 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Shc1P98083 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Shc1P98083 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Shc1P98083 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shc1P98083 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shc1P98083 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shc1P98083 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shc1P98083 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Shc1P98083 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Shc1P98083 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.53■□□□□ 0.88
Shc1P98083 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Shc1P98083 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Shc1P98083 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
Shc1P98083 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.52■□□□□ 0.88
Shc1P98083 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.52■□□□□ 0.88
Shc1P98083 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Shc1P98083 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Shc1P98083 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Shc1P98083 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Shc1P98083 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Shc1P98083 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Shc1P98083 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Shc1P98083 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Shc1P98083 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Shc1P98083 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Shc1P98083 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shc1P98083 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shc1P98083 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.49■□□□□ 0.87
Shc1P98083 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.49■□□□□ 0.87
Shc1P98083 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shc1P98083 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.49■□□□□ 0.87
Shc1P98083 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Shc1P98083 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shc1P98083 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shc1P98083 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Shc1P98083 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shc1P98083 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.47■□□□□ 0.87
Shc1P98083 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Shc1P98083 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shc1P98083 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Shc1P98083 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.46■□□□□ 0.87
Shc1P98083 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Shc1P98083 Gm9812-201ENSMUST00000061934 968 ntBASIC20.45■□□□□ 0.86
Shc1P98083 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Shc1P98083 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Shc1P98083 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shc1P98083 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shc1P98083 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Shc1P98083 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shc1P98083 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Shc1P98083 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.44■□□□□ 0.86
Shc1P98083 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.44■□□□□ 0.86
Shc1P98083 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Shc1P98083 Gm11175-201ENSMUST00000116172 543 ntBASIC20.43■□□□□ 0.86
Shc1P98083 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Shc1P98083 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms