Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PrkdcP97313 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PrkdcP97313 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
PrkdcP97313 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PrkdcP97313 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PrkdcP97313 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PrkdcP97313 Gm43566-201ENSMUST00000196851 808 ntBASIC16.54■□□□□ 0.24
PrkdcP97313 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PrkdcP97313 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.53■□□□□ 0.24
PrkdcP97313 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC16.53■□□□□ 0.24
PrkdcP97313 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.52■□□□□ 0.24
PrkdcP97313 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PrkdcP97313 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PrkdcP97313 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.52■□□□□ 0.23
PrkdcP97313 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.52■□□□□ 0.23
PrkdcP97313 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PrkdcP97313 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
PrkdcP97313 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PrkdcP97313 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC16.51■□□□□ 0.23
PrkdcP97313 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PrkdcP97313 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PrkdcP97313 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.51■□□□□ 0.23
PrkdcP97313 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PrkdcP97313 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.5■□□□□ 0.23
PrkdcP97313 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC16.5■□□□□ 0.23
PrkdcP97313 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PrkdcP97313 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PrkdcP97313 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PrkdcP97313 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PrkdcP97313 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PrkdcP97313 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PrkdcP97313 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC16.49■□□□□ 0.23
PrkdcP97313 AC122317.2-201ENSMUST00000218708 1248 ntBASIC16.49■□□□□ 0.23
PrkdcP97313 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PrkdcP97313 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PrkdcP97313 Gm45444-201ENSMUST00000211394 898 ntBASIC16.48■□□□□ 0.23
PrkdcP97313 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PrkdcP97313 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.47■□□□□ 0.23
PrkdcP97313 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC16.47■□□□□ 0.23
PrkdcP97313 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.47■□□□□ 0.23
PrkdcP97313 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PrkdcP97313 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PrkdcP97313 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PrkdcP97313 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PrkdcP97313 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PrkdcP97313 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PrkdcP97313 Gm9905-201ENSMUST00000065740 1845 ntBASIC16.45■□□□□ 0.22
PrkdcP97313 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PrkdcP97313 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PrkdcP97313 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PrkdcP97313 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC16.44■□□□□ 0.22
PrkdcP97313 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PrkdcP97313 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PrkdcP97313 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PrkdcP97313 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
PrkdcP97313 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PrkdcP97313 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
PrkdcP97313 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.43■□□□□ 0.22
PrkdcP97313 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PrkdcP97313 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PrkdcP97313 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PrkdcP97313 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PrkdcP97313 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.42■□□□□ 0.22
PrkdcP97313 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PrkdcP97313 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PrkdcP97313 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PrkdcP97313 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.42■□□□□ 0.22
PrkdcP97313 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PrkdcP97313 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PrkdcP97313 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC16.41■□□□□ 0.22
PrkdcP97313 Gm37136-201ENSMUST00000194368 194 ntBASIC16.41■□□□□ 0.22
PrkdcP97313 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.41■□□□□ 0.22
PrkdcP97313 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PrkdcP97313 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PrkdcP97313 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PrkdcP97313 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PrkdcP97313 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PrkdcP97313 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PrkdcP97313 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PrkdcP97313 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.39■□□□□ 0.21
PrkdcP97313 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PrkdcP97313 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.39■□□□□ 0.21
PrkdcP97313 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PrkdcP97313 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PrkdcP97313 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PrkdcP97313 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PrkdcP97313 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PrkdcP97313 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PrkdcP97313 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PrkdcP97313 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PrkdcP97313 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC16.37■□□□□ 0.21
PrkdcP97313 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PrkdcP97313 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PrkdcP97313 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PrkdcP97313 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.36■□□□□ 0.21
PrkdcP97313 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PrkdcP97313 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PrkdcP97313 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PrkdcP97313 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PrkdcP97313 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms