Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gabra1P62812 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Gabra1P62812 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gabra1P62812 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gabra1P62812 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gabra1P62812 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gabra1P62812 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gabra1P62812 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gabra1P62812 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gabra1P62812 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gabra1P62812 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.32■□□□□ 0.68
Gabra1P62812 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gabra1P62812 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gabra1P62812 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Gabra1P62812 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gabra1P62812 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gabra1P62812 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gabra1P62812 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gabra1P62812 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gabra1P62812 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gabra1P62812 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gabra1P62812 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gabra1P62812 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.29■□□□□ 0.68
Gabra1P62812 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Gabra1P62812 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Gabra1P62812 Gm8109-201ENSMUST00000194076 746 ntBASIC19.29■□□□□ 0.68
Gabra1P62812 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gabra1P62812 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gabra1P62812 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gabra1P62812 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gabra1P62812 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gabra1P62812 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gabra1P62812 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.28■□□□□ 0.68
Gabra1P62812 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.28■□□□□ 0.68
Gabra1P62812 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Gabra1P62812 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gabra1P62812 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gabra1P62812 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gabra1P62812 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gabra1P62812 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Gabra1P62812 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gabra1P62812 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gabra1P62812 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gabra1P62812 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gabra1P62812 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gabra1P62812 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gabra1P62812 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gabra1P62812 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gabra1P62812 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gabra1P62812 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.24■□□□□ 0.67
Gabra1P62812 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gabra1P62812 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Gabra1P62812 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.24■□□□□ 0.67
Gabra1P62812 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gabra1P62812 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gabra1P62812 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gabra1P62812 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.23■□□□□ 0.67
Gabra1P62812 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gabra1P62812 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gabra1P62812 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.22■□□□□ 0.67
Gabra1P62812 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gabra1P62812 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Gabra1P62812 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gabra1P62812 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Gabra1P62812 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Gabra1P62812 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gabra1P62812 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gabra1P62812 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gabra1P62812 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gabra1P62812 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gabra1P62812 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gabra1P62812 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Gabra1P62812 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.2■□□□□ 0.66
Gabra1P62812 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Gabra1P62812 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gabra1P62812 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gabra1P62812 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Gabra1P62812 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.18■□□□□ 0.66
Gabra1P62812 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gabra1P62812 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gabra1P62812 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gabra1P62812 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gabra1P62812 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gabra1P62812 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gabra1P62812 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gabra1P62812 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gabra1P62812 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gabra1P62812 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gabra1P62812 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gabra1P62812 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gabra1P62812 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gabra1P62812 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gabra1P62812 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Gabra1P62812 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gabra1P62812 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Gabra1P62812 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gabra1P62812 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gabra1P62812 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Gabra1P62812 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gabra1P62812 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms