Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sox3P53784 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sox3P53784 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sox3P53784 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sox3P53784 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Sox3P53784 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.85■■□□□ 1.09
Sox3P53784 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sox3P53784 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.84■■□□□ 1.09
Sox3P53784 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.84■■□□□ 1.09
Sox3P53784 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Sox3P53784 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sox3P53784 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Sox3P53784 Gm27502-201ENSMUST00000183495 199 ntBASIC21.83■■□□□ 1.09
Sox3P53784 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Sox3P53784 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sox3P53784 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Sox3P53784 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Sox3P53784 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.81■■□□□ 1.08
Sox3P53784 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sox3P53784 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Sox3P53784 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sox3P53784 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.8■■□□□ 1.08
Sox3P53784 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sox3P53784 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
Sox3P53784 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sox3P53784 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.78■■□□□ 1.08
Sox3P53784 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Sox3P53784 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Sox3P53784 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Sox3P53784 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sox3P53784 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Sox3P53784 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
Sox3P53784 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Sox3P53784 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
Sox3P53784 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sox3P53784 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sox3P53784 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.75■■□□□ 1.07
Sox3P53784 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sox3P53784 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sox3P53784 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Sox3P53784 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sox3P53784 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Sox3P53784 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Sox3P53784 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Sox3P53784 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Sox3P53784 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sox3P53784 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sox3P53784 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sox3P53784 Gm30023-201ENSMUST00000197970 889 ntBASIC21.72■■□□□ 1.07
Sox3P53784 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sox3P53784 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sox3P53784 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sox3P53784 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Sox3P53784 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Sox3P53784 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sox3P53784 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sox3P53784 Gm14523-201ENSMUST00000117260 558 ntBASIC21.7■■□□□ 1.06
Sox3P53784 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sox3P53784 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sox3P53784 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sox3P53784 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sox3P53784 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Sox3P53784 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sox3P53784 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sox3P53784 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sox3P53784 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sox3P53784 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sox3P53784 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.67■■□□□ 1.06
Sox3P53784 Mir3960-201ENSMUST00000198213 73 ntBASIC21.66■■□□□ 1.06
Sox3P53784 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Sox3P53784 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sox3P53784 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sox3P53784 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sox3P53784 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sox3P53784 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Sox3P53784 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sox3P53784 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.64■■□□□ 1.05
Sox3P53784 Gm45364-201ENSMUST00000210883 159 ntBASIC21.64■■□□□ 1.05
Sox3P53784 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sox3P53784 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.64■■□□□ 1.05
Sox3P53784 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sox3P53784 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.64■■□□□ 1.05
Sox3P53784 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Sox3P53784 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.64■■□□□ 1.05
Sox3P53784 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sox3P53784 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.63■■□□□ 1.05
Sox3P53784 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sox3P53784 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sox3P53784 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sox3P53784 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sox3P53784 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sox3P53784 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sox3P53784 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sox3P53784 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Sox3P53784 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Sox3P53784 Gm5921-201ENSMUST00000075898 882 ntBASIC21.61■■□□□ 1.05
Sox3P53784 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sox3P53784 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sox3P53784 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.6■■□□□ 1.05
Sox3P53784 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms