Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hist1h1aP43275 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hist1h1aP43275 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hist1h1aP43275 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hist1h1aP43275 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hist1h1aP43275 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Hist1h1aP43275 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Hist1h1aP43275 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hist1h1aP43275 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Hist1h1aP43275 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Hist1h1aP43275 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hist1h1aP43275 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hist1h1aP43275 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hist1h1aP43275 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hist1h1aP43275 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Hist1h1aP43275 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hist1h1aP43275 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hist1h1aP43275 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.76■□□□□ 0.59
Hist1h1aP43275 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hist1h1aP43275 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.76■□□□□ 0.59
Hist1h1aP43275 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.76■□□□□ 0.59
Hist1h1aP43275 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Hist1h1aP43275 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hist1h1aP43275 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hist1h1aP43275 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hist1h1aP43275 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hist1h1aP43275 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hist1h1aP43275 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hist1h1aP43275 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hist1h1aP43275 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hist1h1aP43275 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Hist1h1aP43275 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hist1h1aP43275 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hist1h1aP43275 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hist1h1aP43275 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hist1h1aP43275 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hist1h1aP43275 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hist1h1aP43275 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hist1h1aP43275 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hist1h1aP43275 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.72■□□□□ 0.59
Hist1h1aP43275 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hist1h1aP43275 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Hist1h1aP43275 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hist1h1aP43275 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hist1h1aP43275 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hist1h1aP43275 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.71■□□□□ 0.59
Hist1h1aP43275 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hist1h1aP43275 Particl-201ENSMUST00000205370 1560 ntBASIC18.71■□□□□ 0.59
Hist1h1aP43275 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hist1h1aP43275 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hist1h1aP43275 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Hist1h1aP43275 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Hist1h1aP43275 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hist1h1aP43275 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.7■□□□□ 0.58
Hist1h1aP43275 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hist1h1aP43275 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hist1h1aP43275 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Hist1h1aP43275 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hist1h1aP43275 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Hist1h1aP43275 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hist1h1aP43275 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hist1h1aP43275 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hist1h1aP43275 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hist1h1aP43275 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hist1h1aP43275 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hist1h1aP43275 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hist1h1aP43275 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Hist1h1aP43275 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hist1h1aP43275 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hist1h1aP43275 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hist1h1aP43275 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hist1h1aP43275 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Hist1h1aP43275 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hist1h1aP43275 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hist1h1aP43275 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hist1h1aP43275 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hist1h1aP43275 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hist1h1aP43275 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hist1h1aP43275 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hist1h1aP43275 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hist1h1aP43275 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.65■□□□□ 0.58
Hist1h1aP43275 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hist1h1aP43275 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hist1h1aP43275 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hist1h1aP43275 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hist1h1aP43275 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hist1h1aP43275 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hist1h1aP43275 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Hist1h1aP43275 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hist1h1aP43275 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hist1h1aP43275 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hist1h1aP43275 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.63■□□□□ 0.57
Hist1h1aP43275 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hist1h1aP43275 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hist1h1aP43275 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hist1h1aP43275 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Hist1h1aP43275 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Hist1h1aP43275 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hist1h1aP43275 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hist1h1aP43275 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms