Protein–RNA interactions for Protein: P35428

Hes1, Transcription factor HES-1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hes1P35428 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Hes1P35428 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hes1P35428 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Hes1P35428 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.77■□□□□ 0.6
Hes1P35428 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.77■□□□□ 0.6
Hes1P35428 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Hes1P35428 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Hes1P35428 Gm7432-201ENSMUST00000210343 879 ntBASIC18.76■□□□□ 0.59
Hes1P35428 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hes1P35428 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Hes1P35428 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.75■□□□□ 0.59
Hes1P35428 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hes1P35428 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hes1P35428 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hes1P35428 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hes1P35428 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.74■□□□□ 0.59
Hes1P35428 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Hes1P35428 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Hes1P35428 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hes1P35428 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hes1P35428 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hes1P35428 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hes1P35428 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hes1P35428 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hes1P35428 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Hes1P35428 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hes1P35428 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hes1P35428 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hes1P35428 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hes1P35428 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Hes1P35428 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hes1P35428 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.72■□□□□ 0.59
Hes1P35428 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
Hes1P35428 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.72■□□□□ 0.59
Hes1P35428 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.72■□□□□ 0.59
Hes1P35428 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hes1P35428 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Hes1P35428 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hes1P35428 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hes1P35428 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hes1P35428 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hes1P35428 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hes1P35428 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.7■□□□□ 0.58
Hes1P35428 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.7■□□□□ 0.58
Hes1P35428 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.7■□□□□ 0.58
Hes1P35428 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Hes1P35428 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hes1P35428 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hes1P35428 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hes1P35428 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.69■□□□□ 0.58
Hes1P35428 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Hes1P35428 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Hes1P35428 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Hes1P35428 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hes1P35428 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hes1P35428 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
Hes1P35428 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Hes1P35428 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hes1P35428 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hes1P35428 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
Hes1P35428 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hes1P35428 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hes1P35428 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hes1P35428 Gm11599-201ENSMUST00000118720 878 ntBASIC18.66■□□□□ 0.58
Hes1P35428 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hes1P35428 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hes1P35428 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Hes1P35428 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hes1P35428 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hes1P35428 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hes1P35428 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hes1P35428 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Hes1P35428 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Hes1P35428 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hes1P35428 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hes1P35428 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hes1P35428 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Hes1P35428 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hes1P35428 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hes1P35428 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Hes1P35428 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hes1P35428 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hes1P35428 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hes1P35428 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hes1P35428 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hes1P35428 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Hes1P35428 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hes1P35428 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hes1P35428 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Hes1P35428 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hes1P35428 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Hes1P35428 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.6■□□□□ 0.57
Hes1P35428 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hes1P35428 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.59■□□□□ 0.57
Hes1P35428 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hes1P35428 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.59■□□□□ 0.57
Hes1P35428 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hes1P35428 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hes1P35428 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Hes1P35428 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms