Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.03■□□□□ 0.8
Igh-VJ558P01758 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Igh-VJ558P01758 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Igh-VJ558P01758 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Igh-VJ558P01758 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Igh-VJ558P01758 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Igh-VJ558P01758 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Igh-VJ558P01758 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Igh-VJ558P01758 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.01■□□□□ 0.79
Igh-VJ558P01758 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Igh-VJ558P01758 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Igh-VJ558P01758 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20■□□□□ 0.79
Igh-VJ558P01758 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Igh-VJ558P01758 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Igh-VJ558P01758 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Igh-VJ558P01758 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Igh-VJ558P01758 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Igh-VJ558P01758 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.99■□□□□ 0.79
Igh-VJ558P01758 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Igh-VJ558P01758 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Igh-VJ558P01758 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Igh-VJ558P01758 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Igh-VJ558P01758 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Igh-VJ558P01758 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Igh-VJ558P01758 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Igh-VJ558P01758 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Igh-VJ558P01758 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Igh-VJ558P01758 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.97■□□□□ 0.79
Igh-VJ558P01758 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
Igh-VJ558P01758 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Igh-VJ558P01758 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Igh-VJ558P01758 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Igh-VJ558P01758 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Igh-VJ558P01758 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Igh-VJ558P01758 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Igh-VJ558P01758 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Igh-VJ558P01758 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Igh-VJ558P01758 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Igh-VJ558P01758 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Igh-VJ558P01758 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Igh-VJ558P01758 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Igh-VJ558P01758 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.95■□□□□ 0.78
Igh-VJ558P01758 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.95■□□□□ 0.78
Igh-VJ558P01758 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Igh-VJ558P01758 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Igh-VJ558P01758 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Igh-VJ558P01758 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Igh-VJ558P01758 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Igh-VJ558P01758 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Igh-VJ558P01758 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.93■□□□□ 0.78
Igh-VJ558P01758 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Igh-VJ558P01758 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Igh-VJ558P01758 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.92■□□□□ 0.78
Igh-VJ558P01758 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Igh-VJ558P01758 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Igh-VJ558P01758 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.92■□□□□ 0.78
Igh-VJ558P01758 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Igh-VJ558P01758 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Igh-VJ558P01758 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Igh-VJ558P01758 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Igh-VJ558P01758 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Igh-VJ558P01758 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Igh-VJ558P01758 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.89■□□□□ 0.77
Igh-VJ558P01758 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Igh-VJ558P01758 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Igh-VJ558P01758 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Igh-VJ558P01758 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Igh-VJ558P01758 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Igh-VJ558P01758 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Igh-VJ558P01758 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Igh-VJ558P01758 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Igh-VJ558P01758 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Igh-VJ558P01758 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Igh-VJ558P01758 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Igh-VJ558P01758 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
Igh-VJ558P01758 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Igh-VJ558P01758 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Igh-VJ558P01758 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Igh-VJ558P01758 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Igh-VJ558P01758 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Igh-VJ558P01758 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Igh-VJ558P01758 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Igh-VJ558P01758 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Igh-VJ558P01758 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Igh-VJ558P01758 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Igh-VJ558P01758 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Igh-VJ558P01758 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Igh-VJ558P01758 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Igh-VJ558P01758 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Igh-VJ558P01758 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Igh-VJ558P01758 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.83■□□□□ 0.77
Igh-VJ558P01758 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Igh-VJ558P01758 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.82■□□□□ 0.76
Igh-VJ558P01758 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Igh-VJ558P01758 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Igh-VJ558P01758 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Igh-VJ558P01758 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Igh-VJ558P01758 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Igh-VJ558P01758 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Igh-VJ558P01758 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms