Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Cacna1hO88427 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Cacna1hO88427 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Cacna1hO88427 Gm9812-201ENSMUST00000061934 968 ntBASIC23.37■■□□□ 1.33
Cacna1hO88427 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Cacna1hO88427 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Cacna1hO88427 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.37■■□□□ 1.33
Cacna1hO88427 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.37■■□□□ 1.33
Cacna1hO88427 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cacna1hO88427 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cacna1hO88427 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cacna1hO88427 Gm42501-201ENSMUST00000200220 1026 ntBASIC23.36■■□□□ 1.33
Cacna1hO88427 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Cacna1hO88427 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
Cacna1hO88427 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cacna1hO88427 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cacna1hO88427 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Cacna1hO88427 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cacna1hO88427 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cacna1hO88427 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cacna1hO88427 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.32
Cacna1hO88427 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.32■■□□□ 1.32
Cacna1hO88427 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Cacna1hO88427 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC23.32■■□□□ 1.32
Cacna1hO88427 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Cacna1hO88427 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Cacna1hO88427 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC23.3■■□□□ 1.32
Cacna1hO88427 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cacna1hO88427 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cacna1hO88427 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Cacna1hO88427 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC23.29■■□□□ 1.32
Cacna1hO88427 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
Cacna1hO88427 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Cacna1hO88427 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cacna1hO88427 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cacna1hO88427 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC23.27■■□□□ 1.32
Cacna1hO88427 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cacna1hO88427 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cacna1hO88427 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC23.26■■□□□ 1.31
Cacna1hO88427 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cacna1hO88427 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Cacna1hO88427 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Cacna1hO88427 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cacna1hO88427 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cacna1hO88427 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cacna1hO88427 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC23.25■■□□□ 1.31
Cacna1hO88427 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Cacna1hO88427 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Cacna1hO88427 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cacna1hO88427 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Cacna1hO88427 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Cacna1hO88427 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Cacna1hO88427 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Cacna1hO88427 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.23■■□□□ 1.31
Cacna1hO88427 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Cacna1hO88427 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cacna1hO88427 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Cacna1hO88427 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cacna1hO88427 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.22■■□□□ 1.31
Cacna1hO88427 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cacna1hO88427 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.2■■□□□ 1.3
Cacna1hO88427 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cacna1hO88427 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Cacna1hO88427 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cacna1hO88427 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.19■■□□□ 1.3
Cacna1hO88427 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cacna1hO88427 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC23.19■■□□□ 1.3
Cacna1hO88427 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC23.17■■□□□ 1.3
Cacna1hO88427 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cacna1hO88427 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cacna1hO88427 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cacna1hO88427 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Cacna1hO88427 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.15■■□□□ 1.3
Cacna1hO88427 Gm18755-201ENSMUST00000218030 1099 ntBASIC23.15■■□□□ 1.3
Cacna1hO88427 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Cacna1hO88427 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cacna1hO88427 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.15■■□□□ 1.3
Cacna1hO88427 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cacna1hO88427 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Cacna1hO88427 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cacna1hO88427 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC23.12■■□□□ 1.29
Cacna1hO88427 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cacna1hO88427 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Cacna1hO88427 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Cacna1hO88427 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cacna1hO88427 Gm13241-201ENSMUST00000094493 780 ntBASIC23.11■■□□□ 1.29
Cacna1hO88427 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cacna1hO88427 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cacna1hO88427 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC23.1■■□□□ 1.29
Cacna1hO88427 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Cacna1hO88427 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cacna1hO88427 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cacna1hO88427 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cacna1hO88427 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.09■■□□□ 1.29
Cacna1hO88427 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.09■■□□□ 1.29
Cacna1hO88427 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Cacna1hO88427 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cacna1hO88427 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Cacna1hO88427 Slc35b2-207ENSMUST00000226086 850 ntBASIC23.08■■□□□ 1.29
Cacna1hO88427 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 102.2 ms