Protein–RNA interactions for Protein: O55242

Sigmar1, Sigma non-opioid intracellular receptor 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sigmar1O55242 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Sigmar1O55242 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sigmar1O55242 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sigmar1O55242 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.84■□□□□ 0.13
Sigmar1O55242 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sigmar1O55242 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC15.84■□□□□ 0.13
Sigmar1O55242 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC15.83■□□□□ 0.13
Sigmar1O55242 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Sigmar1O55242 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Sigmar1O55242 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sigmar1O55242 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.83■□□□□ 0.12
Sigmar1O55242 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC15.83■□□□□ 0.12
Sigmar1O55242 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sigmar1O55242 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sigmar1O55242 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Sigmar1O55242 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sigmar1O55242 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sigmar1O55242 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sigmar1O55242 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Sigmar1O55242 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Sigmar1O55242 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sigmar1O55242 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sigmar1O55242 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sigmar1O55242 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sigmar1O55242 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sigmar1O55242 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sigmar1O55242 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sigmar1O55242 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC15.8■□□□□ 0.12
Sigmar1O55242 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sigmar1O55242 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC15.79■□□□□ 0.12
Sigmar1O55242 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sigmar1O55242 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sigmar1O55242 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sigmar1O55242 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sigmar1O55242 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sigmar1O55242 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sigmar1O55242 Gm10616-201ENSMUST00000205285 2127 ntBASIC15.79■□□□□ 0.12
Sigmar1O55242 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Sigmar1O55242 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Sigmar1O55242 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Sigmar1O55242 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sigmar1O55242 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Sigmar1O55242 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sigmar1O55242 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sigmar1O55242 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sigmar1O55242 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sigmar1O55242 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sigmar1O55242 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sigmar1O55242 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Sigmar1O55242 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sigmar1O55242 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sigmar1O55242 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sigmar1O55242 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sigmar1O55242 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sigmar1O55242 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sigmar1O55242 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sigmar1O55242 H3f3aos-201ENSMUST00000097448 2905 ntBASIC15.74■□□□□ 0.11
Sigmar1O55242 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Sigmar1O55242 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Sigmar1O55242 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sigmar1O55242 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sigmar1O55242 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sigmar1O55242 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sigmar1O55242 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sigmar1O55242 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sigmar1O55242 Iqck-206ENSMUST00000208658 2891 ntBASIC15.73■□□□□ 0.11
Sigmar1O55242 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sigmar1O55242 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sigmar1O55242 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sigmar1O55242 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Sigmar1O55242 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sigmar1O55242 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sigmar1O55242 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sigmar1O55242 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Sigmar1O55242 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sigmar1O55242 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sigmar1O55242 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sigmar1O55242 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sigmar1O55242 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sigmar1O55242 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sigmar1O55242 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sigmar1O55242 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sigmar1O55242 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sigmar1O55242 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC15.7■□□□□ 0.1
Sigmar1O55242 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sigmar1O55242 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Sigmar1O55242 AL845457.1-201ENSMUST00000197244 68 ntBASIC15.69■□□□□ 0.1
Sigmar1O55242 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sigmar1O55242 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sigmar1O55242 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sigmar1O55242 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Sigmar1O55242 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Sigmar1O55242 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sigmar1O55242 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sigmar1O55242 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sigmar1O55242 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sigmar1O55242 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Sigmar1O55242 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sigmar1O55242 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sigmar1O55242 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms