Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh12O55134 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh12O55134 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh12O55134 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh12O55134 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.67■□□□□ 0.9
Pcdh12O55134 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdh12O55134 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Pcdh12O55134 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh12O55134 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Pcdh12O55134 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh12O55134 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh12O55134 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh12O55134 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh12O55134 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh12O55134 Gm37136-201ENSMUST00000194368 194 ntBASIC20.65■□□□□ 0.9
Pcdh12O55134 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdh12O55134 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdh12O55134 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh12O55134 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Pcdh12O55134 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.64■□□□□ 0.89
Pcdh12O55134 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh12O55134 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh12O55134 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh12O55134 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh12O55134 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.63■□□□□ 0.89
Pcdh12O55134 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh12O55134 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh12O55134 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh12O55134 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh12O55134 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Pcdh12O55134 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh12O55134 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh12O55134 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh12O55134 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh12O55134 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh12O55134 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh12O55134 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh12O55134 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Pcdh12O55134 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh12O55134 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh12O55134 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.59■□□□□ 0.89
Pcdh12O55134 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh12O55134 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh12O55134 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh12O55134 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdh12O55134 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.58■□□□□ 0.89
Pcdh12O55134 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdh12O55134 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Pcdh12O55134 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Pcdh12O55134 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh12O55134 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.57■□□□□ 0.88
Pcdh12O55134 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.57■□□□□ 0.88
Pcdh12O55134 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh12O55134 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.56■□□□□ 0.88
Pcdh12O55134 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.56■□□□□ 0.88
Pcdh12O55134 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh12O55134 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh12O55134 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh12O55134 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh12O55134 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Pcdh12O55134 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh12O55134 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh12O55134 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh12O55134 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh12O55134 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh12O55134 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.53■□□□□ 0.88
Pcdh12O55134 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh12O55134 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh12O55134 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh12O55134 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh12O55134 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh12O55134 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh12O55134 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh12O55134 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Pcdh12O55134 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh12O55134 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Pcdh12O55134 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh12O55134 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh12O55134 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh12O55134 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Pcdh12O55134 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Pcdh12O55134 Gm4799-201ENSMUST00000095396 657 ntBASIC20.51■□□□□ 0.87
Pcdh12O55134 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Pcdh12O55134 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh12O55134 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh12O55134 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdh12O55134 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh12O55134 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh12O55134 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh12O55134 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh12O55134 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh12O55134 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Pcdh12O55134 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.49■□□□□ 0.87
Pcdh12O55134 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.49■□□□□ 0.87
Pcdh12O55134 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh12O55134 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Pcdh12O55134 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh12O55134 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh12O55134 Gm6311-201ENSMUST00000073790 878 ntBASIC20.47■□□□□ 0.87
Pcdh12O55134 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms