Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Trdmt1O55055 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.95■■□□□ 1.74
Trdmt1O55055 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Trdmt1O55055 Gm37847-201ENSMUST00000192163 1497 ntBASIC25.94■■□□□ 1.74
Trdmt1O55055 Gm31748-201ENSMUST00000194938 1497 ntBASIC25.94■■□□□ 1.74
Trdmt1O55055 AC153911.1-201ENSMUST00000220378 758 ntBASIC25.94■■□□□ 1.74
Trdmt1O55055 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
Trdmt1O55055 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trdmt1O55055 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trdmt1O55055 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
Trdmt1O55055 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Trdmt1O55055 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Trdmt1O55055 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Trdmt1O55055 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Trdmt1O55055 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC25.91■■□□□ 1.74
Trdmt1O55055 Terc-201ENSMUST00000082862 423 ntBASIC25.91■■□□□ 1.74
Trdmt1O55055 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Trdmt1O55055 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Trdmt1O55055 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Trdmt1O55055 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
Trdmt1O55055 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Trdmt1O55055 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Trdmt1O55055 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC25.9■■□□□ 1.74
Trdmt1O55055 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Trdmt1O55055 Gm5067-201ENSMUST00000170449 1009 ntBASIC25.89■■□□□ 1.74
Trdmt1O55055 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC25.89■■□□□ 1.74
Trdmt1O55055 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Trdmt1O55055 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC25.88■■□□□ 1.73
Trdmt1O55055 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Trdmt1O55055 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Trdmt1O55055 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Trdmt1O55055 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Trdmt1O55055 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
Trdmt1O55055 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC25.86■■□□□ 1.73
Trdmt1O55055 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Trdmt1O55055 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Trdmt1O55055 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Trdmt1O55055 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Trdmt1O55055 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Trdmt1O55055 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
Trdmt1O55055 Gm10420-201ENSMUST00000121713 882 ntBASIC25.83■■□□□ 1.73
Trdmt1O55055 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Trdmt1O55055 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Trdmt1O55055 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
Trdmt1O55055 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Trdmt1O55055 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Trdmt1O55055 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC25.81■■□□□ 1.72
Trdmt1O55055 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
Trdmt1O55055 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC25.81■■□□□ 1.72
Trdmt1O55055 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC25.8■■□□□ 1.72
Trdmt1O55055 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Trdmt1O55055 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Trdmt1O55055 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Trdmt1O55055 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Trdmt1O55055 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Trdmt1O55055 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
Trdmt1O55055 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Trdmt1O55055 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Trdmt1O55055 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Trdmt1O55055 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
Trdmt1O55055 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC25.78■■□□□ 1.72
Trdmt1O55055 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Trdmt1O55055 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Trdmt1O55055 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Trdmt1O55055 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Trdmt1O55055 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Trdmt1O55055 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Trdmt1O55055 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC25.75■■□□□ 1.71
Trdmt1O55055 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Trdmt1O55055 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
Trdmt1O55055 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Trdmt1O55055 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC25.74■■□□□ 1.71
Trdmt1O55055 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Trdmt1O55055 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Trdmt1O55055 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Trdmt1O55055 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Trdmt1O55055 Amer2-203ENSMUST00000225247 2662 ntBASIC25.72■■□□□ 1.71
Trdmt1O55055 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC25.71■■□□□ 1.71
Trdmt1O55055 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Trdmt1O55055 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC25.71■■□□□ 1.71
Trdmt1O55055 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Trdmt1O55055 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Trdmt1O55055 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.7■■□□□ 1.7
Trdmt1O55055 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Trdmt1O55055 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
Trdmt1O55055 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
Trdmt1O55055 Gm5921-201ENSMUST00000075898 882 ntBASIC25.69■■□□□ 1.7
Trdmt1O55055 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
Trdmt1O55055 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Trdmt1O55055 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC25.67■■□□□ 1.7
Trdmt1O55055 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
Trdmt1O55055 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
Trdmt1O55055 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Trdmt1O55055 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Trdmt1O55055 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC25.65■■□□□ 1.7
Trdmt1O55055 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC25.65■■□□□ 1.7
Trdmt1O55055 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Trdmt1O55055 Gm44428-201ENSMUST00000204474 874 ntBASIC25.64■■□□□ 1.7
Trdmt1O55055 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC25.64■■□□□ 1.7
Trdmt1O55055 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms