Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Prom1O54990 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Prom1O54990 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC25.9■■□□□ 1.74
Prom1O54990 Gm14121-201ENSMUST00000121441 1380 ntBASIC25.9■■□□□ 1.74
Prom1O54990 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Prom1O54990 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
Prom1O54990 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Prom1O54990 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Prom1O54990 Gm37847-201ENSMUST00000192163 1497 ntBASIC25.87■■□□□ 1.73
Prom1O54990 Gm31748-201ENSMUST00000194938 1497 ntBASIC25.87■■□□□ 1.73
Prom1O54990 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC25.87■■□□□ 1.73
Prom1O54990 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.87■■□□□ 1.73
Prom1O54990 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC25.86■■□□□ 1.73
Prom1O54990 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Prom1O54990 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Prom1O54990 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Prom1O54990 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Prom1O54990 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Prom1O54990 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
Prom1O54990 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC25.84■■□□□ 1.73
Prom1O54990 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Prom1O54990 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
Prom1O54990 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Prom1O54990 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC25.83■■□□□ 1.73
Prom1O54990 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Prom1O54990 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Prom1O54990 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Prom1O54990 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
Prom1O54990 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC25.82■■□□□ 1.72
Prom1O54990 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Prom1O54990 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Prom1O54990 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC25.81■■□□□ 1.72
Prom1O54990 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC25.8■■□□□ 1.72
Prom1O54990 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Prom1O54990 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Prom1O54990 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
Prom1O54990 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Prom1O54990 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Prom1O54990 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Prom1O54990 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC25.78■■□□□ 1.72
Prom1O54990 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Prom1O54990 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
Prom1O54990 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Prom1O54990 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Prom1O54990 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Prom1O54990 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Prom1O54990 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Prom1O54990 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
Prom1O54990 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC25.76■■□□□ 1.71
Prom1O54990 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Prom1O54990 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Prom1O54990 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC25.75■■□□□ 1.71
Prom1O54990 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Prom1O54990 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC25.75■■□□□ 1.71
Prom1O54990 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
Prom1O54990 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Prom1O54990 Terc-201ENSMUST00000082862 423 ntBASIC25.75■■□□□ 1.71
Prom1O54990 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Prom1O54990 Gm5067-201ENSMUST00000170449 1009 ntBASIC25.74■■□□□ 1.71
Prom1O54990 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC25.74■■□□□ 1.71
Prom1O54990 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
Prom1O54990 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Prom1O54990 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Prom1O54990 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Prom1O54990 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Prom1O54990 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
Prom1O54990 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Prom1O54990 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC25.7■■□□□ 1.7
Prom1O54990 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC25.69■■□□□ 1.7
Prom1O54990 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Prom1O54990 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Prom1O54990 AC153911.1-201ENSMUST00000220378 758 ntBASIC25.68■■□□□ 1.7
Prom1O54990 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Prom1O54990 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
Prom1O54990 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Prom1O54990 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Prom1O54990 Gm10420-201ENSMUST00000121713 882 ntBASIC25.66■■□□□ 1.7
Prom1O54990 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
Prom1O54990 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Prom1O54990 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Prom1O54990 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC25.65■■□□□ 1.7
Prom1O54990 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Prom1O54990 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
Prom1O54990 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Prom1O54990 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC25.64■■□□□ 1.7
Prom1O54990 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Prom1O54990 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
Prom1O54990 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Prom1O54990 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Prom1O54990 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Prom1O54990 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Prom1O54990 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC25.62■■□□□ 1.69
Prom1O54990 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Prom1O54990 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
Prom1O54990 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Prom1O54990 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC25.59■■□□□ 1.69
Prom1O54990 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Prom1O54990 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
Prom1O54990 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.56■■□□□ 1.68
Prom1O54990 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms