Protein–RNA interactions for Protein: O54743

Foxf2, Forkhead box protein F2, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf2O54743 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Foxf2O54743 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Foxf2O54743 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Foxf2O54743 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.42■□□□□ 0.7
Foxf2O54743 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Foxf2O54743 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.41■□□□□ 0.7
Foxf2O54743 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Foxf2O54743 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Foxf2O54743 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Foxf2O54743 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.41■□□□□ 0.7
Foxf2O54743 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.41■□□□□ 0.7
Foxf2O54743 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Foxf2O54743 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Foxf2O54743 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Foxf2O54743 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.4■□□□□ 0.7
Foxf2O54743 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Foxf2O54743 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Foxf2O54743 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Foxf2O54743 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Foxf2O54743 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.39■□□□□ 0.69
Foxf2O54743 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.39■□□□□ 0.69
Foxf2O54743 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Foxf2O54743 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Foxf2O54743 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Foxf2O54743 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Foxf2O54743 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Foxf2O54743 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Foxf2O54743 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.37■□□□□ 0.69
Foxf2O54743 Mir3960-201ENSMUST00000198213 73 ntBASIC19.37■□□□□ 0.69
Foxf2O54743 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Foxf2O54743 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Foxf2O54743 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.36■□□□□ 0.69
Foxf2O54743 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Foxf2O54743 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Foxf2O54743 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxf2O54743 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Foxf2O54743 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Foxf2O54743 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxf2O54743 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.35■□□□□ 0.69
Foxf2O54743 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Foxf2O54743 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxf2O54743 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxf2O54743 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.34■□□□□ 0.69
Foxf2O54743 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Foxf2O54743 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Foxf2O54743 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Foxf2O54743 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxf2O54743 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxf2O54743 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.32■□□□□ 0.68
Foxf2O54743 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Foxf2O54743 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Foxf2O54743 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.32■□□□□ 0.68
Foxf2O54743 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxf2O54743 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.31■□□□□ 0.68
Foxf2O54743 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxf2O54743 Gm45364-201ENSMUST00000210883 159 ntBASIC19.31■□□□□ 0.68
Foxf2O54743 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.31■□□□□ 0.68
Foxf2O54743 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxf2O54743 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxf2O54743 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.3■□□□□ 0.68
Foxf2O54743 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxf2O54743 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxf2O54743 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxf2O54743 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxf2O54743 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxf2O54743 Gm6311-201ENSMUST00000073790 878 ntBASIC19.29■□□□□ 0.68
Foxf2O54743 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Foxf2O54743 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxf2O54743 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxf2O54743 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Foxf2O54743 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Foxf2O54743 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.28■□□□□ 0.68
Foxf2O54743 Gm9812-201ENSMUST00000061934 968 ntBASIC19.28■□□□□ 0.68
Foxf2O54743 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxf2O54743 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Foxf2O54743 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxf2O54743 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Foxf2O54743 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Foxf2O54743 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.27■□□□□ 0.68
Foxf2O54743 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Foxf2O54743 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Foxf2O54743 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Foxf2O54743 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Foxf2O54743 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Foxf2O54743 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Foxf2O54743 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Foxf2O54743 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Foxf2O54743 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Foxf2O54743 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.25■□□□□ 0.67
Foxf2O54743 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Foxf2O54743 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Foxf2O54743 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.25■□□□□ 0.67
Foxf2O54743 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Foxf2O54743 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Foxf2O54743 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.24■□□□□ 0.67
Foxf2O54743 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Foxf2O54743 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Foxf2O54743 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Foxf2O54743 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Foxf2O54743 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms