Protein–RNA interactions for Protein: O08992

Sdcbp, Syntenin-1, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SdcbpO08992 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SdcbpO08992 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SdcbpO08992 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SdcbpO08992 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SdcbpO08992 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SdcbpO08992 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SdcbpO08992 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SdcbpO08992 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.23■□□□□ 0.67
SdcbpO08992 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SdcbpO08992 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SdcbpO08992 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.22■□□□□ 0.67
SdcbpO08992 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SdcbpO08992 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SdcbpO08992 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SdcbpO08992 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SdcbpO08992 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SdcbpO08992 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SdcbpO08992 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SdcbpO08992 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.21■□□□□ 0.67
SdcbpO08992 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SdcbpO08992 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SdcbpO08992 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SdcbpO08992 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.2■□□□□ 0.66
SdcbpO08992 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SdcbpO08992 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SdcbpO08992 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SdcbpO08992 Gm37136-201ENSMUST00000194368 194 ntBASIC19.19■□□□□ 0.66
SdcbpO08992 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SdcbpO08992 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SdcbpO08992 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SdcbpO08992 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SdcbpO08992 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SdcbpO08992 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SdcbpO08992 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SdcbpO08992 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SdcbpO08992 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.17■□□□□ 0.66
SdcbpO08992 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SdcbpO08992 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SdcbpO08992 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SdcbpO08992 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SdcbpO08992 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SdcbpO08992 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SdcbpO08992 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SdcbpO08992 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SdcbpO08992 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SdcbpO08992 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SdcbpO08992 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.14■□□□□ 0.65
SdcbpO08992 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SdcbpO08992 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SdcbpO08992 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SdcbpO08992 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SdcbpO08992 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SdcbpO08992 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.13■□□□□ 0.65
SdcbpO08992 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SdcbpO08992 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SdcbpO08992 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SdcbpO08992 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SdcbpO08992 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.12■□□□□ 0.65
SdcbpO08992 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.12■□□□□ 0.65
SdcbpO08992 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SdcbpO08992 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.11■□□□□ 0.65
SdcbpO08992 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SdcbpO08992 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SdcbpO08992 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SdcbpO08992 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.11■□□□□ 0.65
SdcbpO08992 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SdcbpO08992 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SdcbpO08992 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SdcbpO08992 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SdcbpO08992 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
SdcbpO08992 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SdcbpO08992 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SdcbpO08992 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SdcbpO08992 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SdcbpO08992 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SdcbpO08992 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SdcbpO08992 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SdcbpO08992 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SdcbpO08992 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SdcbpO08992 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SdcbpO08992 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
SdcbpO08992 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SdcbpO08992 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SdcbpO08992 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SdcbpO08992 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SdcbpO08992 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.08■□□□□ 0.64
SdcbpO08992 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SdcbpO08992 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SdcbpO08992 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SdcbpO08992 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SdcbpO08992 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SdcbpO08992 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.06■□□□□ 0.64
SdcbpO08992 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.05■□□□□ 0.64
SdcbpO08992 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SdcbpO08992 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SdcbpO08992 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SdcbpO08992 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SdcbpO08992 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SdcbpO08992 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SdcbpO08992 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms