Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.33■■□□□ 1.33
Gm3854A0A1B0GSS6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Gm3854A0A1B0GSS6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Gm3854A0A1B0GSS6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Gm3854A0A1B0GSS6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Gm3854A0A1B0GSS6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Gm3854A0A1B0GSS6 Gm5067-201ENSMUST00000170449 1009 ntBASIC23.31■■□□□ 1.32
Gm3854A0A1B0GSS6 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.31■■□□□ 1.32
Gm3854A0A1B0GSS6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Gm3854A0A1B0GSS6 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.31■■□□□ 1.32
Gm3854A0A1B0GSS6 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.3■■□□□ 1.32
Gm3854A0A1B0GSS6 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.3■■□□□ 1.32
Gm3854A0A1B0GSS6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Gm3854A0A1B0GSS6 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.3■■□□□ 1.32
Gm3854A0A1B0GSS6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.3■■□□□ 1.32
Gm3854A0A1B0GSS6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Gm3854A0A1B0GSS6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Gm3854A0A1B0GSS6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.29■■□□□ 1.32
Gm3854A0A1B0GSS6 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Gm3854A0A1B0GSS6 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Gm3854A0A1B0GSS6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Gm3854A0A1B0GSS6 Terc-201ENSMUST00000082862 423 ntBASIC23.28■■□□□ 1.32
Gm3854A0A1B0GSS6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Gm3854A0A1B0GSS6 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Gm3854A0A1B0GSS6 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.27■■□□□ 1.32
Gm3854A0A1B0GSS6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Gm3854A0A1B0GSS6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Gm3854A0A1B0GSS6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Gm3854A0A1B0GSS6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.26■■□□□ 1.31
Gm3854A0A1B0GSS6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Gm3854A0A1B0GSS6 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.26■■□□□ 1.31
Gm3854A0A1B0GSS6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Gm3854A0A1B0GSS6 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Gm3854A0A1B0GSS6 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Gm3854A0A1B0GSS6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Gm3854A0A1B0GSS6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Gm3854A0A1B0GSS6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Gm3854A0A1B0GSS6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Gm3854A0A1B0GSS6 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Gm3854A0A1B0GSS6 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Gm3854A0A1B0GSS6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.23■■□□□ 1.31
Gm3854A0A1B0GSS6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Gm3854A0A1B0GSS6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.23■■□□□ 1.31
Gm3854A0A1B0GSS6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Gm3854A0A1B0GSS6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Gm3854A0A1B0GSS6 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Gm3854A0A1B0GSS6 Gm10420-201ENSMUST00000121713 882 ntBASIC23.21■■□□□ 1.31
Gm3854A0A1B0GSS6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
Gm3854A0A1B0GSS6 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
Gm3854A0A1B0GSS6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Gm3854A0A1B0GSS6 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.2■■□□□ 1.3
Gm3854A0A1B0GSS6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.2■■□□□ 1.3
Gm3854A0A1B0GSS6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Gm3854A0A1B0GSS6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Gm3854A0A1B0GSS6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Gm3854A0A1B0GSS6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Gm3854A0A1B0GSS6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Gm3854A0A1B0GSS6 Amer2-203ENSMUST00000225247 2662 ntBASIC23.18■■□□□ 1.3
Gm3854A0A1B0GSS6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Gm3854A0A1B0GSS6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Gm3854A0A1B0GSS6 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Gm3854A0A1B0GSS6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Gm3854A0A1B0GSS6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Gm3854A0A1B0GSS6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.16■■□□□ 1.3
Gm3854A0A1B0GSS6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
Gm3854A0A1B0GSS6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Gm3854A0A1B0GSS6 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.16■■□□□ 1.3
Gm3854A0A1B0GSS6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Gm3854A0A1B0GSS6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Gm3854A0A1B0GSS6 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Gm3854A0A1B0GSS6 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Gm3854A0A1B0GSS6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Gm3854A0A1B0GSS6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC23.14■■□□□ 1.29
Gm3854A0A1B0GSS6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Gm3854A0A1B0GSS6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Gm3854A0A1B0GSS6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
Gm3854A0A1B0GSS6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Gm3854A0A1B0GSS6 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Gm3854A0A1B0GSS6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Gm3854A0A1B0GSS6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Gm3854A0A1B0GSS6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Gm3854A0A1B0GSS6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.12■■□□□ 1.29
Gm3854A0A1B0GSS6 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Gm3854A0A1B0GSS6 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Gm3854A0A1B0GSS6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Gm3854A0A1B0GSS6 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Gm3854A0A1B0GSS6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Gm3854A0A1B0GSS6 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Gm3854A0A1B0GSS6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Gm3854A0A1B0GSS6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.11■■□□□ 1.29
Gm3854A0A1B0GSS6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Gm3854A0A1B0GSS6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Gm3854A0A1B0GSS6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Gm3854A0A1B0GSS6 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Gm3854A0A1B0GSS6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Gm3854A0A1B0GSS6 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Gm3854A0A1B0GSS6 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Gm3854A0A1B0GSS6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Gm3854A0A1B0GSS6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.29
Gm3854A0A1B0GSS6 Gm5921-201ENSMUST00000075898 882 ntBASIC23.07■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms