Protein–RNA interactions for Protein: A0A140T8U4

Rpl36-ps4, Ribosomal protein L36, pseudogene 4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl36-ps4A0A140T8U4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC16.62■□□□□ 0.25
Rpl36-ps4A0A140T8U4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rpl36-ps4A0A140T8U4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rpl36-ps4A0A140T8U4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpl36-ps4A0A140T8U4 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpl36-ps4A0A140T8U4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Rpl36-ps4A0A140T8U4 Gm26115-201ENSMUST00000175605 87 ntBASIC16.61■□□□□ 0.25
Rpl36-ps4A0A140T8U4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpl36-ps4A0A140T8U4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpl36-ps4A0A140T8U4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rpl36-ps4A0A140T8U4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rpl36-ps4A0A140T8U4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl36-ps4A0A140T8U4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl36-ps4A0A140T8U4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rpl36-ps4A0A140T8U4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl36-ps4A0A140T8U4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl36-ps4A0A140T8U4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl36-ps4A0A140T8U4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl36-ps4A0A140T8U4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpl36-ps4A0A140T8U4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rpl36-ps4A0A140T8U4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rpl36-ps4A0A140T8U4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpl36-ps4A0A140T8U4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpl36-ps4A0A140T8U4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpl36-ps4A0A140T8U4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rpl36-ps4A0A140T8U4 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Rpl36-ps4A0A140T8U4 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpl36-ps4A0A140T8U4 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpl36-ps4A0A140T8U4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpl36-ps4A0A140T8U4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpl36-ps4A0A140T8U4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC16.56■□□□□ 0.24
Rpl36-ps4A0A140T8U4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rpl36-ps4A0A140T8U4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpl36-ps4A0A140T8U4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC16.55■□□□□ 0.24
Rpl36-ps4A0A140T8U4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpl36-ps4A0A140T8U4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpl36-ps4A0A140T8U4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC16.55■□□□□ 0.24
Rpl36-ps4A0A140T8U4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpl36-ps4A0A140T8U4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpl36-ps4A0A140T8U4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpl36-ps4A0A140T8U4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rpl36-ps4A0A140T8U4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rpl36-ps4A0A140T8U4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpl36-ps4A0A140T8U4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rpl36-ps4A0A140T8U4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC16.53■□□□□ 0.24
Rpl36-ps4A0A140T8U4 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rpl36-ps4A0A140T8U4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpl36-ps4A0A140T8U4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Rpl36-ps4A0A140T8U4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpl36-ps4A0A140T8U4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpl36-ps4A0A140T8U4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rpl36-ps4A0A140T8U4 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Rpl36-ps4A0A140T8U4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rpl36-ps4A0A140T8U4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpl36-ps4A0A140T8U4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpl36-ps4A0A140T8U4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpl36-ps4A0A140T8U4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpl36-ps4A0A140T8U4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpl36-ps4A0A140T8U4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpl36-ps4A0A140T8U4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpl36-ps4A0A140T8U4 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpl36-ps4A0A140T8U4 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpl36-ps4A0A140T8U4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpl36-ps4A0A140T8U4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpl36-ps4A0A140T8U4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpl36-ps4A0A140T8U4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rpl36-ps4A0A140T8U4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpl36-ps4A0A140T8U4 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpl36-ps4A0A140T8U4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rpl36-ps4A0A140T8U4 Particl-201ENSMUST00000205370 1560 ntBASIC16.48■□□□□ 0.23
Rpl36-ps4A0A140T8U4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rpl36-ps4A0A140T8U4 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Rpl36-ps4A0A140T8U4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rpl36-ps4A0A140T8U4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Rpl36-ps4A0A140T8U4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Rpl36-ps4A0A140T8U4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpl36-ps4A0A140T8U4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpl36-ps4A0A140T8U4 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Rpl36-ps4A0A140T8U4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpl36-ps4A0A140T8U4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpl36-ps4A0A140T8U4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC16.46■□□□□ 0.23
Rpl36-ps4A0A140T8U4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpl36-ps4A0A140T8U4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpl36-ps4A0A140T8U4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpl36-ps4A0A140T8U4 Gm42699-201ENSMUST00000198104 1657 ntBASIC16.46■□□□□ 0.23
Rpl36-ps4A0A140T8U4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rpl36-ps4A0A140T8U4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rpl36-ps4A0A140T8U4 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rpl36-ps4A0A140T8U4 Gm37847-201ENSMUST00000192163 1497 ntBASIC16.45■□□□□ 0.22
Rpl36-ps4A0A140T8U4 Gm31748-201ENSMUST00000194938 1497 ntBASIC16.45■□□□□ 0.22
Rpl36-ps4A0A140T8U4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rpl36-ps4A0A140T8U4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rpl36-ps4A0A140T8U4 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rpl36-ps4A0A140T8U4 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Rpl36-ps4A0A140T8U4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Rpl36-ps4A0A140T8U4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rpl36-ps4A0A140T8U4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rpl36-ps4A0A140T8U4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Rpl36-ps4A0A140T8U4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rpl36-ps4A0A140T8U4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms