Protein–RNA interactions for Protein: A0A140LHH9

Gm35339, Predicted gene, 35339, mousemouse

Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm35339A0A140LHH9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC50.63■■■■■ 5.7
Gm35339A0A140LHH9 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC50.62■■■■■ 5.69
Gm35339A0A140LHH9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC50.6■■■■■ 5.69
Gm35339A0A140LHH9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC50.59■■■■■ 5.69
Gm35339A0A140LHH9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC50.58■■■■■ 5.69
Gm35339A0A140LHH9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC50.58■■■■■ 5.69
Gm35339A0A140LHH9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC50.57■■■■■ 5.69
Gm35339A0A140LHH9 Terc-201ENSMUST00000082862 423 ntBASIC50.57■■■■■ 5.69
Gm35339A0A140LHH9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC50.57■■■■■ 5.69
Gm35339A0A140LHH9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC50.55■■■■■ 5.68
Gm35339A0A140LHH9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC50.55■■■■■ 5.68
Gm35339A0A140LHH9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC50.54■■■■■ 5.68
Gm35339A0A140LHH9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC50.54■■■■■ 5.68
Gm35339A0A140LHH9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC50.54■■■■■ 5.68
Gm35339A0A140LHH9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC50.53■■■■■ 5.68
Gm35339A0A140LHH9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC50.53■■■■■ 5.68
Gm35339A0A140LHH9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC50.53■■■■■ 5.68
Gm35339A0A140LHH9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC50.51■■■■■ 5.68
Gm35339A0A140LHH9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC50.51■■■■■ 5.68
Gm35339A0A140LHH9 Gm43566-201ENSMUST00000196851 808 ntBASIC50.51■■■■■ 5.68
Gm35339A0A140LHH9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC50.5■■■■■ 5.68
Gm35339A0A140LHH9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC50.49■■■■■ 5.67
Gm35339A0A140LHH9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC50.49■■■■■ 5.67
Gm35339A0A140LHH9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC50.47■■■■■ 5.67
Gm35339A0A140LHH9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC50.45■■■■■ 5.67
Gm35339A0A140LHH9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC50.44■■■■■ 5.67
Gm35339A0A140LHH9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC50.44■■■■■ 5.67
Gm35339A0A140LHH9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC50.44■■■■■ 5.66
Gm35339A0A140LHH9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC50.43■■■■■ 5.66
Gm35339A0A140LHH9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC50.43■■■■■ 5.66
Gm35339A0A140LHH9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC50.42■■■■■ 5.66
Gm35339A0A140LHH9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC50.42■■■■■ 5.66
Gm35339A0A140LHH9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC50.41■■■■■ 5.66
Gm35339A0A140LHH9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC50.41■■■■■ 5.66
Gm35339A0A140LHH9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC50.4■■■■■ 5.66
Gm35339A0A140LHH9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC50.4■■■■■ 5.66
Gm35339A0A140LHH9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC50.4■■■■■ 5.66
Gm35339A0A140LHH9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC50.4■■■■■ 5.66
Gm35339A0A140LHH9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC50.4■■■■■ 5.66
Gm35339A0A140LHH9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC50.39■■■■■ 5.66
Gm35339A0A140LHH9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC50.38■■■■■ 5.65
Gm35339A0A140LHH9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC50.37■■■■■ 5.65
Gm35339A0A140LHH9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC50.37■■■■■ 5.65
Gm35339A0A140LHH9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC50.37■■■■■ 5.65
Gm35339A0A140LHH9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC50.36■■■■■ 5.65
Gm35339A0A140LHH9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC50.36■■■■■ 5.65
Gm35339A0A140LHH9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC50.36■■■■■ 5.65
Gm35339A0A140LHH9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC50.35■■■■■ 5.65
Gm35339A0A140LHH9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC50.35■■■■■ 5.65
Gm35339A0A140LHH9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC50.35■■■■■ 5.65
Gm35339A0A140LHH9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC50.35■■■■■ 5.65
Gm35339A0A140LHH9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC50.35■■■■■ 5.65
Gm35339A0A140LHH9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC50.34■■■■■ 5.65
Gm35339A0A140LHH9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC50.33■■■■■ 5.65
Gm35339A0A140LHH9 Gm13238-201ENSMUST00000117655 780 ntBASIC50.33■■■■■ 5.65
Gm35339A0A140LHH9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC50.33■■■■■ 5.65
Gm35339A0A140LHH9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC50.31■■■■■ 5.64
Gm35339A0A140LHH9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC50.31■■■■■ 5.64
Gm35339A0A140LHH9 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC50.29■■■■■ 5.64
Gm35339A0A140LHH9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC50.29■■■■■ 5.64
Gm35339A0A140LHH9 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC50.29■■■■■ 5.64
Gm35339A0A140LHH9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC50.28■■■■■ 5.64
Gm35339A0A140LHH9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC50.28■■■■■ 5.64
Gm35339A0A140LHH9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC50.27■■■■■ 5.64
Gm35339A0A140LHH9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC50.26■■■■■ 5.64
Gm35339A0A140LHH9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC50.26■■■■■ 5.64
Gm35339A0A140LHH9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC50.26■■■■■ 5.64
Gm35339A0A140LHH9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC50.25■■■■■ 5.64
Gm35339A0A140LHH9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC50.25■■■■■ 5.63
Gm35339A0A140LHH9 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC50.24■■■■■ 5.63
Gm35339A0A140LHH9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC50.24■■■■■ 5.63
Gm35339A0A140LHH9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC50.23■■■■■ 5.63
Gm35339A0A140LHH9 AC093043.1-201ENSMUST00000226700 898 ntBASIC50.22■■■■■ 5.63
Gm35339A0A140LHH9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC50.22■■■■■ 5.63
Gm35339A0A140LHH9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC50.21■■■■■ 5.63
Gm35339A0A140LHH9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC50.21■■■■■ 5.63
Gm35339A0A140LHH9 Gm45444-201ENSMUST00000211394 898 ntBASIC50.2■■■■■ 5.63
Gm35339A0A140LHH9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC50.19■■■■■ 5.63
Gm35339A0A140LHH9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC50.17■■■■■ 5.62
Gm35339A0A140LHH9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC50.16■■■■■ 5.62
Gm35339A0A140LHH9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC50.16■■■■■ 5.62
Gm35339A0A140LHH9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC50.16■■■■■ 5.62
Gm35339A0A140LHH9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC50.15■■■■■ 5.62
Gm35339A0A140LHH9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC50.14■■■■■ 5.62
Gm35339A0A140LHH9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC50.13■■■■■ 5.62
Gm35339A0A140LHH9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC50.11■■■■■ 5.61
Gm35339A0A140LHH9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC50.11■■■■■ 5.61
Gm35339A0A140LHH9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC50.1■■■■■ 5.61
Gm35339A0A140LHH9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC50.1■■■■■ 5.61
Gm35339A0A140LHH9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC50.09■■■■■ 5.61
Gm35339A0A140LHH9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC50.09■■■■■ 5.61
Gm35339A0A140LHH9 Gm43592-201ENSMUST00000196922 1165 ntBASIC50.08■■■■■ 5.61
Gm35339A0A140LHH9 Gm44428-201ENSMUST00000204474 874 ntBASIC50.07■■■■■ 5.61
Gm35339A0A140LHH9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC50.06■■■■■ 5.6
Gm35339A0A140LHH9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC50.06■■■■■ 5.6
Gm35339A0A140LHH9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC50.06■■■■■ 5.6
Gm35339A0A140LHH9 Gm15820-201ENSMUST00000201566 728 ntBASIC50.05■■■■■ 5.6
Gm35339A0A140LHH9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC50.05■■■■■ 5.6
Gm35339A0A140LHH9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC50.05■■■■■ 5.6
Gm35339A0A140LHH9 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC50.05■■■■■ 5.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms