Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9d-4A0A0G2JG37 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9d-4A0A0G2JG37 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trav9d-4A0A0G2JG37 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9d-4A0A0G2JG37 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Trav9d-4A0A0G2JG37 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav9d-4A0A0G2JG37 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav9d-4A0A0G2JG37 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav9d-4A0A0G2JG37 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trav9d-4A0A0G2JG37 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trav9d-4A0A0G2JG37 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Trav9d-4A0A0G2JG37 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav9d-4A0A0G2JG37 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trav9d-4A0A0G2JG37 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav9d-4A0A0G2JG37 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav9d-4A0A0G2JG37 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav9d-4A0A0G2JG37 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Trav9d-4A0A0G2JG37 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9d-4A0A0G2JG37 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9d-4A0A0G2JG37 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9d-4A0A0G2JG37 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9d-4A0A0G2JG37 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9d-4A0A0G2JG37 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9d-4A0A0G2JG37 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trav9d-4A0A0G2JG37 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9d-4A0A0G2JG37 H3f3aos-201ENSMUST00000097448 2905 ntBASIC15.62■□□□□ 0.09
Trav9d-4A0A0G2JG37 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9d-4A0A0G2JG37 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9d-4A0A0G2JG37 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9d-4A0A0G2JG37 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9d-4A0A0G2JG37 Gm17641-201ENSMUST00000166328 2350 ntBASIC15.61■□□□□ 0.09
Trav9d-4A0A0G2JG37 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9d-4A0A0G2JG37 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9d-4A0A0G2JG37 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9d-4A0A0G2JG37 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9d-4A0A0G2JG37 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9d-4A0A0G2JG37 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trav9d-4A0A0G2JG37 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9d-4A0A0G2JG37 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav9d-4A0A0G2JG37 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trav9d-4A0A0G2JG37 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav9d-4A0A0G2JG37 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav9d-4A0A0G2JG37 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav9d-4A0A0G2JG37 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav9d-4A0A0G2JG37 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trav9d-4A0A0G2JG37 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav9d-4A0A0G2JG37 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav9d-4A0A0G2JG37 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav9d-4A0A0G2JG37 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav9d-4A0A0G2JG37 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9d-4A0A0G2JG37 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9d-4A0A0G2JG37 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9d-4A0A0G2JG37 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9d-4A0A0G2JG37 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9d-4A0A0G2JG37 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9d-4A0A0G2JG37 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav9d-4A0A0G2JG37 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav9d-4A0A0G2JG37 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav9d-4A0A0G2JG37 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav9d-4A0A0G2JG37 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav9d-4A0A0G2JG37 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav9d-4A0A0G2JG37 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav9d-4A0A0G2JG37 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav9d-4A0A0G2JG37 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav9d-4A0A0G2JG37 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav9d-4A0A0G2JG37 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav9d-4A0A0G2JG37 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav9d-4A0A0G2JG37 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav9d-4A0A0G2JG37 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trav9d-4A0A0G2JG37 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav9d-4A0A0G2JG37 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trav9d-4A0A0G2JG37 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav9d-4A0A0G2JG37 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC15.56■□□□□ 0.08
Trav9d-4A0A0G2JG37 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav9d-4A0A0G2JG37 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav9d-4A0A0G2JG37 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav9d-4A0A0G2JG37 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC15.56■□□□□ 0.08
Trav9d-4A0A0G2JG37 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9d-4A0A0G2JG37 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9d-4A0A0G2JG37 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9d-4A0A0G2JG37 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9d-4A0A0G2JG37 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9d-4A0A0G2JG37 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9d-4A0A0G2JG37 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9d-4A0A0G2JG37 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9d-4A0A0G2JG37 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9d-4A0A0G2JG37 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav9d-4A0A0G2JG37 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav9d-4A0A0G2JG37 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav9d-4A0A0G2JG37 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Trav9d-4A0A0G2JG37 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trav9d-4A0A0G2JG37 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav9d-4A0A0G2JG37 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav9d-4A0A0G2JG37 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav9d-4A0A0G2JG37 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trav9d-4A0A0G2JG37 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav9d-4A0A0G2JG37 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav9d-4A0A0G2JG37 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trav9d-4A0A0G2JG37 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC15.52■□□□□ 0.08
Trav9d-4A0A0G2JG37 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms