Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav13n-1A0A0G2JEU8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13n-1A0A0G2JEU8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13n-1A0A0G2JEU8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC16.48■□□□□ 0.23
Trav13n-1A0A0G2JEU8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13n-1A0A0G2JEU8 Gm4799-201ENSMUST00000095396 657 ntBASIC16.48■□□□□ 0.23
Trav13n-1A0A0G2JEU8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13n-1A0A0G2JEU8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13n-1A0A0G2JEU8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav13n-1A0A0G2JEU8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav13n-1A0A0G2JEU8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trav13n-1A0A0G2JEU8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC16.47■□□□□ 0.23
Trav13n-1A0A0G2JEU8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.47■□□□□ 0.23
Trav13n-1A0A0G2JEU8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav13n-1A0A0G2JEU8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav13n-1A0A0G2JEU8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13n-1A0A0G2JEU8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13n-1A0A0G2JEU8 Gm11175-201ENSMUST00000116172 543 ntBASIC16.46■□□□□ 0.23
Trav13n-1A0A0G2JEU8 Mir6538-201ENSMUST00000183713 110 ntBASIC16.46■□□□□ 0.23
Trav13n-1A0A0G2JEU8 Gm37136-201ENSMUST00000194368 194 ntBASIC16.46■□□□□ 0.23
Trav13n-1A0A0G2JEU8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13n-1A0A0G2JEU8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Trav13n-1A0A0G2JEU8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Trav13n-1A0A0G2JEU8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13n-1A0A0G2JEU8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13n-1A0A0G2JEU8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13n-1A0A0G2JEU8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13n-1A0A0G2JEU8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13n-1A0A0G2JEU8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trav13n-1A0A0G2JEU8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13n-1A0A0G2JEU8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13n-1A0A0G2JEU8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trav13n-1A0A0G2JEU8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC16.44■□□□□ 0.22
Trav13n-1A0A0G2JEU8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav13n-1A0A0G2JEU8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav13n-1A0A0G2JEU8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav13n-1A0A0G2JEU8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav13n-1A0A0G2JEU8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC16.43■□□□□ 0.22
Trav13n-1A0A0G2JEU8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13n-1A0A0G2JEU8 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.42■□□□□ 0.22
Trav13n-1A0A0G2JEU8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13n-1A0A0G2JEU8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13n-1A0A0G2JEU8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav13n-1A0A0G2JEU8 Mir3960-201ENSMUST00000198213 73 ntBASIC16.41■□□□□ 0.22
Trav13n-1A0A0G2JEU8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav13n-1A0A0G2JEU8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav13n-1A0A0G2JEU8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC16.41■□□□□ 0.22
Trav13n-1A0A0G2JEU8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav13n-1A0A0G2JEU8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trav13n-1A0A0G2JEU8 Pkd1-207ENSMUST00000228550 1050 ntBASIC16.4■□□□□ 0.22
Trav13n-1A0A0G2JEU8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trav13n-1A0A0G2JEU8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav13n-1A0A0G2JEU8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13n-1A0A0G2JEU8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC16.39■□□□□ 0.21
Trav13n-1A0A0G2JEU8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13n-1A0A0G2JEU8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13n-1A0A0G2JEU8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13n-1A0A0G2JEU8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13n-1A0A0G2JEU8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trav13n-1A0A0G2JEU8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trav13n-1A0A0G2JEU8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trav13n-1A0A0G2JEU8 Scarna2-201ENSMUST00000157560 414 ntBASIC16.36■□□□□ 0.21
Trav13n-1A0A0G2JEU8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13n-1A0A0G2JEU8 Gm11687-201ENSMUST00000118911 886 ntBASIC16.35■□□□□ 0.21
Trav13n-1A0A0G2JEU8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Trav13n-1A0A0G2JEU8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav13n-1A0A0G2JEU8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13n-1A0A0G2JEU8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13n-1A0A0G2JEU8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13n-1A0A0G2JEU8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13n-1A0A0G2JEU8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13n-1A0A0G2JEU8 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13n-1A0A0G2JEU8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13n-1A0A0G2JEU8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC16.34■□□□□ 0.21
Trav13n-1A0A0G2JEU8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13n-1A0A0G2JEU8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13n-1A0A0G2JEU8 Gm9806-201ENSMUST00000051080 552 ntBASIC16.34■□□□□ 0.21
Trav13n-1A0A0G2JEU8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13n-1A0A0G2JEU8 Gm13889-201ENSMUST00000099689 1386 ntBASIC16.34■□□□□ 0.21
Trav13n-1A0A0G2JEU8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13n-1A0A0G2JEU8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav13n-1A0A0G2JEU8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav13n-1A0A0G2JEU8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav13n-1A0A0G2JEU8 Gm45364-201ENSMUST00000210883 159 ntBASIC16.33■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Gm37847-201ENSMUST00000192163 1497 ntBASIC16.32■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Gm31748-201ENSMUST00000194938 1497 ntBASIC16.32■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13n-1A0A0G2JEU8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC16.31■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC16.31■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Trav13n-1A0A0G2JEU8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms