Protein–RNA interactions for Protein: A0A0A6YW37

Ighv1-9, Immunoglobulin heavy variable V1-9 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-9A0A0A6YW37 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-9A0A0A6YW37 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-9A0A0A6YW37 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-9A0A0A6YW37 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.23■□□□□ 0.35
Ighv1-9A0A0A6YW37 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.23■□□□□ 0.35
Ighv1-9A0A0A6YW37 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ighv1-9A0A0A6YW37 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-9A0A0A6YW37 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-9A0A0A6YW37 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.22■□□□□ 0.35
Ighv1-9A0A0A6YW37 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-9A0A0A6YW37 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Ighv1-9A0A0A6YW37 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC17.22■□□□□ 0.35
Ighv1-9A0A0A6YW37 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-9A0A0A6YW37 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-9A0A0A6YW37 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-9A0A0A6YW37 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.21■□□□□ 0.35
Ighv1-9A0A0A6YW37 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-9A0A0A6YW37 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.21■□□□□ 0.34
Ighv1-9A0A0A6YW37 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-9A0A0A6YW37 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ighv1-9A0A0A6YW37 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-9A0A0A6YW37 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Ighv1-9A0A0A6YW37 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-9A0A0A6YW37 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Ighv1-9A0A0A6YW37 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC17.19■□□□□ 0.34
Ighv1-9A0A0A6YW37 Gm42809-201ENSMUST00000198429 1138 ntBASIC17.19■□□□□ 0.34
Ighv1-9A0A0A6YW37 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-9A0A0A6YW37 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-9A0A0A6YW37 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-9A0A0A6YW37 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-9A0A0A6YW37 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-9A0A0A6YW37 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-9A0A0A6YW37 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-9A0A0A6YW37 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.18■□□□□ 0.34
Ighv1-9A0A0A6YW37 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-9A0A0A6YW37 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-9A0A0A6YW37 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-9A0A0A6YW37 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-9A0A0A6YW37 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-9A0A0A6YW37 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Ighv1-9A0A0A6YW37 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-9A0A0A6YW37 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-9A0A0A6YW37 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-9A0A0A6YW37 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-9A0A0A6YW37 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.16■□□□□ 0.34
Ighv1-9A0A0A6YW37 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-9A0A0A6YW37 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ighv1-9A0A0A6YW37 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-9A0A0A6YW37 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-9A0A0A6YW37 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.15■□□□□ 0.34
Ighv1-9A0A0A6YW37 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-9A0A0A6YW37 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.14■□□□□ 0.33
Ighv1-9A0A0A6YW37 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-9A0A0A6YW37 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-9A0A0A6YW37 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-9A0A0A6YW37 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.13■□□□□ 0.33
Ighv1-9A0A0A6YW37 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-9A0A0A6YW37 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-9A0A0A6YW37 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-9A0A0A6YW37 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-9A0A0A6YW37 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ighv1-9A0A0A6YW37 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-9A0A0A6YW37 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-9A0A0A6YW37 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-9A0A0A6YW37 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-9A0A0A6YW37 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-9A0A0A6YW37 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.12■□□□□ 0.33
Ighv1-9A0A0A6YW37 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-9A0A0A6YW37 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-9A0A0A6YW37 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-9A0A0A6YW37 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-9A0A0A6YW37 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-9A0A0A6YW37 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-9A0A0A6YW37 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.1■□□□□ 0.33
Ighv1-9A0A0A6YW37 Gm9939-201ENSMUST00000067161 1154 ntBASIC17.1■□□□□ 0.33
Ighv1-9A0A0A6YW37 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-9A0A0A6YW37 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-9A0A0A6YW37 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-9A0A0A6YW37 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-9A0A0A6YW37 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.09■□□□□ 0.33
Ighv1-9A0A0A6YW37 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ighv1-9A0A0A6YW37 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ighv1-9A0A0A6YW37 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ighv1-9A0A0A6YW37 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-9A0A0A6YW37 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-9A0A0A6YW37 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.08■□□□□ 0.32
Ighv1-9A0A0A6YW37 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-9A0A0A6YW37 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-9A0A0A6YW37 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.07■□□□□ 0.32
Ighv1-9A0A0A6YW37 Gm37136-201ENSMUST00000194368 194 ntBASIC17.07■□□□□ 0.32
Ighv1-9A0A0A6YW37 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.07■□□□□ 0.32
Ighv1-9A0A0A6YW37 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-9A0A0A6YW37 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-9A0A0A6YW37 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ighv1-9A0A0A6YW37 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-9A0A0A6YW37 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-9A0A0A6YW37 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-9A0A0A6YW37 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-9A0A0A6YW37 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-9A0A0A6YW37 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms