Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18,75■□□□□ 0,59
Trav15-2-dv6-2A0A075B650 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18,74■□□□□ 0,59
Trav15-2-dv6-2A0A075B650 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18,74■□□□□ 0,59
Trav15-2-dv6-2A0A075B650 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18,74■□□□□ 0,59
Trav15-2-dv6-2A0A075B650 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18,74■□□□□ 0,59
Trav15-2-dv6-2A0A075B650 Gm42699-201ENSMUST00000198104 1657 ntBASIC18,73■□□□□ 0,59
Trav15-2-dv6-2A0A075B650 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18,73■□□□□ 0,59
Trav15-2-dv6-2A0A075B650 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18,73■□□□□ 0,59
Trav15-2-dv6-2A0A075B650 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18,73■□□□□ 0,59
Trav15-2-dv6-2A0A075B650 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18,73■□□□□ 0,59
Trav15-2-dv6-2A0A075B650 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18,73■□□□□ 0,59
Trav15-2-dv6-2A0A075B650 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18,72■□□□□ 0,59
Trav15-2-dv6-2A0A075B650 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18,72■□□□□ 0,59
Trav15-2-dv6-2A0A075B650 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18,72■□□□□ 0,59
Trav15-2-dv6-2A0A075B650 Gm24970-201ENSMUST00000175582 82 ntBASIC18,72■□□□□ 0,59
Trav15-2-dv6-2A0A075B650 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18,72■□□□□ 0,59
Trav15-2-dv6-2A0A075B650 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18,71■□□□□ 0,59
Trav15-2-dv6-2A0A075B650 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18,71■□□□□ 0,59
Trav15-2-dv6-2A0A075B650 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18,71■□□□□ 0,59
Trav15-2-dv6-2A0A075B650 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18,71■□□□□ 0,59
Trav15-2-dv6-2A0A075B650 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18,71■□□□□ 0,59
Trav15-2-dv6-2A0A075B650 Gm9397-201ENSMUST00000200125 605 ntBASIC18,71■□□□□ 0,59
Trav15-2-dv6-2A0A075B650 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18,71■□□□□ 0,59
Trav15-2-dv6-2A0A075B650 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18,71■□□□□ 0,58
Trav15-2-dv6-2A0A075B650 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18,7■□□□□ 0,58
Trav15-2-dv6-2A0A075B650 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18,7■□□□□ 0,58
Trav15-2-dv6-2A0A075B650 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18,7■□□□□ 0,58
Trav15-2-dv6-2A0A075B650 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18,69■□□□□ 0,58
Trav15-2-dv6-2A0A075B650 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18,69■□□□□ 0,58
Trav15-2-dv6-2A0A075B650 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18,69■□□□□ 0,58
Trav15-2-dv6-2A0A075B650 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18,69■□□□□ 0,58
Trav15-2-dv6-2A0A075B650 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18,69■□□□□ 0,58
Trav15-2-dv6-2A0A075B650 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18,69■□□□□ 0,58
Trav15-2-dv6-2A0A075B650 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18,69■□□□□ 0,58
Trav15-2-dv6-2A0A075B650 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18,69■□□□□ 0,58
Trav15-2-dv6-2A0A075B650 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18,68■□□□□ 0,58
Trav15-2-dv6-2A0A075B650 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18,68■□□□□ 0,58
Trav15-2-dv6-2A0A075B650 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18,68■□□□□ 0,58
Trav15-2-dv6-2A0A075B650 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18,68■□□□□ 0,58
Trav15-2-dv6-2A0A075B650 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18,68■□□□□ 0,58
Trav15-2-dv6-2A0A075B650 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18,68■□□□□ 0,58
Trav15-2-dv6-2A0A075B650 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18,68■□□□□ 0,58
Trav15-2-dv6-2A0A075B650 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18,67■□□□□ 0,58
Trav15-2-dv6-2A0A075B650 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18,67■□□□□ 0,58
Trav15-2-dv6-2A0A075B650 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18,67■□□□□ 0,58
Trav15-2-dv6-2A0A075B650 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18,66■□□□□ 0,58
Trav15-2-dv6-2A0A075B650 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18,66■□□□□ 0,58
Trav15-2-dv6-2A0A075B650 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18,66■□□□□ 0,58
Trav15-2-dv6-2A0A075B650 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18,66■□□□□ 0,58
Trav15-2-dv6-2A0A075B650 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18,66■□□□□ 0,58
Trav15-2-dv6-2A0A075B650 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18,66■□□□□ 0,58
Trav15-2-dv6-2A0A075B650 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18,66■□□□□ 0,58
Trav15-2-dv6-2A0A075B650 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18,66■□□□□ 0,58
Trav15-2-dv6-2A0A075B650 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18,65■□□□□ 0,58
Trav15-2-dv6-2A0A075B650 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18,64■□□□□ 0,58
Trav15-2-dv6-2A0A075B650 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18,64■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18,64■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18,64■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18,64■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18,64■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18,64■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18,64■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18,64■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18,64■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18,63■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18,63■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18,63■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18,63■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18,63■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18,62■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18,62■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18,62■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18,61■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18,61■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18,61■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18,61■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18,6■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18,6■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18,6■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18,6■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18,6■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18,6■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18,6■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18,59■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18,59■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18,59■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18,59■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18,59■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18,59■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18,58■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18,58■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 Gm14121-201ENSMUST00000121441 1380 ntBASIC18,58■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18,58■□□□□ 0,57
Trav15-2-dv6-2A0A075B650 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18,58■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18,58■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18,58■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18,57■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18,57■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18,57■□□□□ 0,56
Trav15-2-dv6-2A0A075B650 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18,57■□□□□ 0,56
Retrieved 100 of 76,532 protein–RNA pairs in 12,4 ms