Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav6-7-dv9A0A075B639 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav6-7-dv9A0A075B639 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav6-7-dv9A0A075B639 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav6-7-dv9A0A075B639 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Trav6-7-dv9A0A075B639 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav6-7-dv9A0A075B639 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trav6-7-dv9A0A075B639 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav6-7-dv9A0A075B639 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Trav6-7-dv9A0A075B639 Gm8503-201ENSMUST00000118131 455 ntBASIC20.34■□□□□ 0.85
Trav6-7-dv9A0A075B639 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav6-7-dv9A0A075B639 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Trav6-7-dv9A0A075B639 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trav6-7-dv9A0A075B639 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trav6-7-dv9A0A075B639 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trav6-7-dv9A0A075B639 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav6-7-dv9A0A075B639 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.32■□□□□ 0.84
Trav6-7-dv9A0A075B639 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Trav6-7-dv9A0A075B639 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.32■□□□□ 0.84
Trav6-7-dv9A0A075B639 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav6-7-dv9A0A075B639 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav6-7-dv9A0A075B639 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav6-7-dv9A0A075B639 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav6-7-dv9A0A075B639 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trav6-7-dv9A0A075B639 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trav6-7-dv9A0A075B639 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.3■□□□□ 0.84
Trav6-7-dv9A0A075B639 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav6-7-dv9A0A075B639 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Trav6-7-dv9A0A075B639 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trav6-7-dv9A0A075B639 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav6-7-dv9A0A075B639 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.29■□□□□ 0.84
Trav6-7-dv9A0A075B639 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trav6-7-dv9A0A075B639 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Trav6-7-dv9A0A075B639 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Trav6-7-dv9A0A075B639 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trav6-7-dv9A0A075B639 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Trav6-7-dv9A0A075B639 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trav6-7-dv9A0A075B639 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.26■□□□□ 0.83
Trav6-7-dv9A0A075B639 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trav6-7-dv9A0A075B639 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav6-7-dv9A0A075B639 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trav6-7-dv9A0A075B639 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.24■□□□□ 0.83
Trav6-7-dv9A0A075B639 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Trav6-7-dv9A0A075B639 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav6-7-dv9A0A075B639 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav6-7-dv9A0A075B639 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav6-7-dv9A0A075B639 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav6-7-dv9A0A075B639 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trav6-7-dv9A0A075B639 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trav6-7-dv9A0A075B639 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav6-7-dv9A0A075B639 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav6-7-dv9A0A075B639 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav6-7-dv9A0A075B639 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.22■□□□□ 0.83
Trav6-7-dv9A0A075B639 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav6-7-dv9A0A075B639 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav6-7-dv9A0A075B639 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav6-7-dv9A0A075B639 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav6-7-dv9A0A075B639 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav6-7-dv9A0A075B639 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.21■□□□□ 0.83
Trav6-7-dv9A0A075B639 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav6-7-dv9A0A075B639 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.21■□□□□ 0.83
Trav6-7-dv9A0A075B639 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.21■□□□□ 0.83
Trav6-7-dv9A0A075B639 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav6-7-dv9A0A075B639 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
Trav6-7-dv9A0A075B639 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.2■□□□□ 0.82
Trav6-7-dv9A0A075B639 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trav6-7-dv9A0A075B639 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav6-7-dv9A0A075B639 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav6-7-dv9A0A075B639 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trav6-7-dv9A0A075B639 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trav6-7-dv9A0A075B639 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav6-7-dv9A0A075B639 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav6-7-dv9A0A075B639 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav6-7-dv9A0A075B639 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav6-7-dv9A0A075B639 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Trav6-7-dv9A0A075B639 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav6-7-dv9A0A075B639 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav6-7-dv9A0A075B639 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav6-7-dv9A0A075B639 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trav6-7-dv9A0A075B639 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trav6-7-dv9A0A075B639 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trav6-7-dv9A0A075B639 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trav6-7-dv9A0A075B639 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Trav6-7-dv9A0A075B639 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trav6-7-dv9A0A075B639 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Trav6-7-dv9A0A075B639 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trav6-7-dv9A0A075B639 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trav6-7-dv9A0A075B639 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav6-7-dv9A0A075B639 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav6-7-dv9A0A075B639 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav6-7-dv9A0A075B639 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav6-7-dv9A0A075B639 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.16■□□□□ 0.82
Trav6-7-dv9A0A075B639 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.15■□□□□ 0.82
Trav6-7-dv9A0A075B639 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.15■□□□□ 0.82
Trav6-7-dv9A0A075B639 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trav6-7-dv9A0A075B639 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trav6-7-dv9A0A075B639 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Trav6-7-dv9A0A075B639 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Trav6-7-dv9A0A075B639 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Trav6-7-dv9A0A075B639 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms