Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav15d-1-dv6d-1A0A075B624 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav15d-1-dv6d-1A0A075B624 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trav15d-1-dv6d-1A0A075B624 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav15d-1-dv6d-1A0A075B624 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav15d-1-dv6d-1A0A075B624 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav15d-1-dv6d-1A0A075B624 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trav15d-1-dv6d-1A0A075B624 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav15d-1-dv6d-1A0A075B624 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trav15d-1-dv6d-1A0A075B624 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav15d-1-dv6d-1A0A075B624 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Trav15d-1-dv6d-1A0A075B624 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Trav15d-1-dv6d-1A0A075B624 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trav15d-1-dv6d-1A0A075B624 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav15d-1-dv6d-1A0A075B624 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav15d-1-dv6d-1A0A075B624 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trav15d-1-dv6d-1A0A075B624 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trav15d-1-dv6d-1A0A075B624 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav15d-1-dv6d-1A0A075B624 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trav15d-1-dv6d-1A0A075B624 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.44■□□□□ 0.7
Trav15d-1-dv6d-1A0A075B624 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.44■□□□□ 0.7
Trav15d-1-dv6d-1A0A075B624 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav15d-1-dv6d-1A0A075B624 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav15d-1-dv6d-1A0A075B624 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trav15d-1-dv6d-1A0A075B624 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trav15d-1-dv6d-1A0A075B624 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trav15d-1-dv6d-1A0A075B624 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav15d-1-dv6d-1A0A075B624 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav15d-1-dv6d-1A0A075B624 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trav15d-1-dv6d-1A0A075B624 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav15d-1-dv6d-1A0A075B624 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trav15d-1-dv6d-1A0A075B624 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trav15d-1-dv6d-1A0A075B624 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav15d-1-dv6d-1A0A075B624 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav15d-1-dv6d-1A0A075B624 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav15d-1-dv6d-1A0A075B624 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav15d-1-dv6d-1A0A075B624 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trav15d-1-dv6d-1A0A075B624 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Trav15d-1-dv6d-1A0A075B624 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Trav15d-1-dv6d-1A0A075B624 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trav15d-1-dv6d-1A0A075B624 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav15d-1-dv6d-1A0A075B624 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trav15d-1-dv6d-1A0A075B624 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav15d-1-dv6d-1A0A075B624 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.39■□□□□ 0.69
Trav15d-1-dv6d-1A0A075B624 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav15d-1-dv6d-1A0A075B624 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav15d-1-dv6d-1A0A075B624 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Trav15d-1-dv6d-1A0A075B624 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Trav15d-1-dv6d-1A0A075B624 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trav15d-1-dv6d-1A0A075B624 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav15d-1-dv6d-1A0A075B624 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav15d-1-dv6d-1A0A075B624 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav15d-1-dv6d-1A0A075B624 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.36■□□□□ 0.69
Trav15d-1-dv6d-1A0A075B624 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav15d-1-dv6d-1A0A075B624 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav15d-1-dv6d-1A0A075B624 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav15d-1-dv6d-1A0A075B624 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trav15d-1-dv6d-1A0A075B624 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trav15d-1-dv6d-1A0A075B624 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Trav15d-1-dv6d-1A0A075B624 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.34■□□□□ 0.69
Trav15d-1-dv6d-1A0A075B624 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav15d-1-dv6d-1A0A075B624 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav15d-1-dv6d-1A0A075B624 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trav15d-1-dv6d-1A0A075B624 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trav15d-1-dv6d-1A0A075B624 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav15d-1-dv6d-1A0A075B624 Gm45855-201ENSMUST00000212546 880 ntBASIC19.32■□□□□ 0.68
Trav15d-1-dv6d-1A0A075B624 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav15d-1-dv6d-1A0A075B624 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav15d-1-dv6d-1A0A075B624 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.32■□□□□ 0.68
Trav15d-1-dv6d-1A0A075B624 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Trav15d-1-dv6d-1A0A075B624 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Trav15d-1-dv6d-1A0A075B624 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.31■□□□□ 0.68
Trav15d-1-dv6d-1A0A075B624 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav15d-1-dv6d-1A0A075B624 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.31■□□□□ 0.68
Trav15d-1-dv6d-1A0A075B624 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trav15d-1-dv6d-1A0A075B624 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav15d-1-dv6d-1A0A075B624 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav15d-1-dv6d-1A0A075B624 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Trav15d-1-dv6d-1A0A075B624 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav15d-1-dv6d-1A0A075B624 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Trav15d-1-dv6d-1A0A075B624 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.3■□□□□ 0.68
Trav15d-1-dv6d-1A0A075B624 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Trav15d-1-dv6d-1A0A075B624 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav15d-1-dv6d-1A0A075B624 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav15d-1-dv6d-1A0A075B624 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav15d-1-dv6d-1A0A075B624 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav15d-1-dv6d-1A0A075B624 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav15d-1-dv6d-1A0A075B624 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.29■□□□□ 0.68
Trav15d-1-dv6d-1A0A075B624 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav15d-1-dv6d-1A0A075B624 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trav15d-1-dv6d-1A0A075B624 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Trav15d-1-dv6d-1A0A075B624 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.28■□□□□ 0.68
Trav15d-1-dv6d-1A0A075B624 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Trav15d-1-dv6d-1A0A075B624 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.27■□□□□ 0.68
Trav15d-1-dv6d-1A0A075B624 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trav15d-1-dv6d-1A0A075B624 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav15d-1-dv6d-1A0A075B624 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trav15d-1-dv6d-1A0A075B624 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav15d-1-dv6d-1A0A075B624 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav15d-1-dv6d-1A0A075B624 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms