Protein–RNA interactions for Protein: A0A075B5W3

Ighv1-53, Immunoglobulin heavy variable 1-53 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-53A0A075B5W3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC17.33■□□□□ 0.36
Ighv1-53A0A075B5W3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv1-53A0A075B5W3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv1-53A0A075B5W3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-53A0A075B5W3 Gm37136-201ENSMUST00000194368 194 ntBASIC17.32■□□□□ 0.36
Ighv1-53A0A075B5W3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-53A0A075B5W3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-53A0A075B5W3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-53A0A075B5W3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-53A0A075B5W3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-53A0A075B5W3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-53A0A075B5W3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-53A0A075B5W3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-53A0A075B5W3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-53A0A075B5W3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.3■□□□□ 0.36
Ighv1-53A0A075B5W3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-53A0A075B5W3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.3■□□□□ 0.36
Ighv1-53A0A075B5W3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-53A0A075B5W3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-53A0A075B5W3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-53A0A075B5W3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ighv1-53A0A075B5W3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-53A0A075B5W3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-53A0A075B5W3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ighv1-53A0A075B5W3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Ighv1-53A0A075B5W3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-53A0A075B5W3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-53A0A075B5W3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-53A0A075B5W3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-53A0A075B5W3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-53A0A075B5W3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ighv1-53A0A075B5W3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-53A0A075B5W3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-53A0A075B5W3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-53A0A075B5W3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-53A0A075B5W3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.26■□□□□ 0.35
Ighv1-53A0A075B5W3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.26■□□□□ 0.35
Ighv1-53A0A075B5W3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-53A0A075B5W3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.26■□□□□ 0.35
Ighv1-53A0A075B5W3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-53A0A075B5W3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-53A0A075B5W3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.25■□□□□ 0.35
Ighv1-53A0A075B5W3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ighv1-53A0A075B5W3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-53A0A075B5W3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-53A0A075B5W3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-53A0A075B5W3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-53A0A075B5W3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.24■□□□□ 0.35
Ighv1-53A0A075B5W3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-53A0A075B5W3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-53A0A075B5W3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ighv1-53A0A075B5W3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-53A0A075B5W3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.23■□□□□ 0.35
Ighv1-53A0A075B5W3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-53A0A075B5W3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.23■□□□□ 0.35
Ighv1-53A0A075B5W3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.23■□□□□ 0.35
Ighv1-53A0A075B5W3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ighv1-53A0A075B5W3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-53A0A075B5W3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ighv1-53A0A075B5W3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.21■□□□□ 0.35
Ighv1-53A0A075B5W3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-53A0A075B5W3 Gm9939-201ENSMUST00000067161 1154 ntBASIC17.21■□□□□ 0.35
Ighv1-53A0A075B5W3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-53A0A075B5W3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ighv1-53A0A075B5W3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-53A0A075B5W3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-53A0A075B5W3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-53A0A075B5W3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-53A0A075B5W3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-53A0A075B5W3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.19■□□□□ 0.34
Ighv1-53A0A075B5W3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Ighv1-53A0A075B5W3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-53A0A075B5W3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-53A0A075B5W3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.18■□□□□ 0.34
Ighv1-53A0A075B5W3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-53A0A075B5W3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-53A0A075B5W3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-53A0A075B5W3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-53A0A075B5W3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-53A0A075B5W3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-53A0A075B5W3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-53A0A075B5W3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-53A0A075B5W3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.17■□□□□ 0.34
Ighv1-53A0A075B5W3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-53A0A075B5W3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-53A0A075B5W3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-53A0A075B5W3 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-53A0A075B5W3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-53A0A075B5W3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.16■□□□□ 0.34
Ighv1-53A0A075B5W3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-53A0A075B5W3 Gm6821-201ENSMUST00000107540 542 ntBASIC17.15■□□□□ 0.34
Ighv1-53A0A075B5W3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-53A0A075B5W3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-53A0A075B5W3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-53A0A075B5W3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.14■□□□□ 0.33
Ighv1-53A0A075B5W3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.14■□□□□ 0.33
Ighv1-53A0A075B5W3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.14■□□□□ 0.33
Ighv1-53A0A075B5W3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-53A0A075B5W3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-53A0A075B5W3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 108.6 ms