RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 GPR179Q6PRD1 2367 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 LY6G6EA0A0G2JKS1 128 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 ZNF839A8K0R7 811 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 RHPN2P1A8MT19 583 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 ZW10O43264 779 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 KLK8O60259 260 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 ZWINTO95229 277 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 LDOC1O95751 146 aaPredicted RBP11.96□□□□□ -0.49
LINC00339-213ENST00000642137 PROCP04070 461 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 CKMT1AP12532 417 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 MTHFD2P13995 350 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 TAC1P20366 129 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 RPA3P35244 121 aaPredicted RBP11.96□□□□□ -0.49
LINC00339-213ENST00000642137 GPR3P46089 330 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 HNMTP50135 292 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 GPR18Q14330 331 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 NR1D2Q14995 579 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 STPG1Q5TH74 334 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 SULT1C3Q6IMI6 304 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 TCAIMQ8N3R3 496 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 PDPRQ8NCN5 879 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 RDH11Q8TC12 318 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 DENND1AQ8TEH3 1009 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 SETD7Q8WTS6 366 aaKnown RBP11.96□□□□□ -0.49
LINC00339-213ENST00000642137 ATL1Q8WXF7 558 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 RHBDF1Q96CC6 855 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 FBXL8Q96CD0 374 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 SLC38A3Q99624 504 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 HGH1Q9BTY7 390 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 MENTQ9BUN1 341 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 RAB11FIP5Q9BXF6 653 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 ARL15Q9NXU5 204 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 UTP6Q9NYH9 597 aaKnown RBP11.96□□□□□ -0.49
LINC00339-213ENST00000642137 CD274Q9NZQ7 290 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 CPSF2Q9P2I0 782 aaKnown RBP11.96□□□□□ -0.49
LINC00339-213ENST00000642137 XPR1Q9UBH6 696 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 RAPGEFL1Q9UHV5 662 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 PTBP2Q9UKA9 531 aaKnown RBP11.96□□□□□ -0.49
LINC00339-213ENST00000642137 BTBD3Q9Y2F9 522 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 RNF215Q9Y6U7 377 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 U3KQA8 63 aa11.96□□□□□ -0.49
LINC00339-213ENST00000642137 OTOGLQ3ZCN5 2332 aa11.95□□□□□ -0.5
LINC00339-213ENST00000642137 COL5A1P20908 1838 aaPredicted RBP11.95□□□□□ -0.5
LINC00339-213ENST00000642137 FAM221BA6H8Z2 402 aa11.95□□□□□ -0.5
LINC00339-213ENST00000642137 LILRA5A6NI73 299 aa11.95□□□□□ -0.5
LINC00339-213ENST00000642137 UBXN8O00124 270 aa11.95□□□□□ -0.5
LINC00339-213ENST00000642137 SH3BP5O60239 455 aa11.95□□□□□ -0.5
LINC00339-213ENST00000642137 GDF9O60383 454 aa11.95□□□□□ -0.5
LINC00339-213ENST00000642137 SMIM24O75264 130 aa11.95□□□□□ -0.5
LINC00339-213ENST00000642137 GUCA1CO95843 209 aa11.95□□□□□ -0.5
LINC00339-213ENST00000642137 S100BP04271 92 aaPredicted RBP11.95□□□□□ -0.5
LINC00339-213ENST00000642137 ERGP11308 486 aa11.95□□□□□ -0.5
LINC00339-213ENST00000642137 CKMT2P17540 419 aa11.95□□□□□ -0.5
LINC00339-213ENST00000642137 SHMT2P34897 504 aa11.95□□□□□ -0.5
LINC00339-213ENST00000642137 GGT5P36269 586 aa11.95□□□□□ -0.5
LINC00339-213ENST00000642137 ETV4P43268 484 aa11.95□□□□□ -0.5
LINC00339-213ENST00000642137 RAB28P51157 221 aa11.95□□□□□ -0.5
LINC00339-213ENST00000642137 MPP2Q14168 576 aa11.95□□□□□ -0.5
LINC00339-213ENST00000642137 CYP2A13Q16696 494 aa11.95□□□□□ -0.5
LINC00339-213ENST00000642137 ZNF438Q7Z4V0 828 aa11.95□□□□□ -0.5
LINC00339-213ENST00000642137 AMIGO1Q86WK6 493 aa11.95□□□□□ -0.5
LINC00339-213ENST00000642137 SLC22A9Q8IVM8 553 aa11.95□□□□□ -0.5
LINC00339-213ENST00000642137 OR4E2Q8NGC2 313 aa11.95□□□□□ -0.5
LINC00339-213ENST00000642137 OR2L8Q8NGY9 312 aa11.95□□□□□ -0.5
LINC00339-213ENST00000642137 HMGCLL1Q8TB92 370 aa11.95□□□□□ -0.5
LINC00339-213ENST00000642137 LCN9Q8WX39 176 aa11.95□□□□□ -0.5
LINC00339-213ENST00000642137 NAT6Q93015 286 aa11.95□□□□□ -0.5
LINC00339-213ENST00000642137 CNDP2Q96KP4 475 aaKnown RBP11.95□□□□□ -0.5
LINC00339-213ENST00000642137 FAM111AQ96PZ2 611 aa11.95□□□□□ -0.5
LINC00339-213ENST00000642137 EGFL8Q99944 293 aa11.95□□□□□ -0.5
LINC00339-213ENST00000642137 C12orf65Q9H3J6 166 aaKnown RBP11.95□□□□□ -0.5
LINC00339-213ENST00000642137 OR6C2Q9NZP2 312 aa11.95□□□□□ -0.5
LINC00339-213ENST00000642137 STOX2Q9P2F5 926 aaPredicted RBP11.95□□□□□ -0.5
LINC00339-213ENST00000642137 SLC17A7Q9P2U7 560 aa11.95□□□□□ -0.5
LINC00339-213ENST00000642137 ASCC3Q8N3C0 2202 aaKnown RBP11.94□□□□□ -0.5
LINC00339-213ENST00000642137 MUC6Q6W4X9 2439 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 TMEM120BA0PK00 339 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 SUPT3HB4E1H0 165 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 G3V2L1 256 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 STX16-NPEPL1H3BU86 382 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 TK2O00142 265 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 STX16O14662 325 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 TAPBPO15533 448 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 DLX3O60479 287 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 CBFA2T3O75081 653 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 SUPT3HO75486 399 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 SLC16A8O95907 504 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 MYL2P10916 166 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 CPA3P15088 417 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 ATP5F1P24539 256 aaPredicted RBP11.94□□□□□ -0.5
LINC00339-213ENST00000642137 IMPA1P29218 277 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 PKLRP30613 574 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 PNLIPRP1P54315 467 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 EPHA4P54764 986 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 ALDH18A1P54886 795 aaKnown RBP11.94□□□□□ -0.5
LINC00339-213ENST00000642137 PPP2R2AP63151 447 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 DAB2P98082 770 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 ANKS6Q68DC2 871 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 METTL2BQ6P1Q9 378 aaKnown RBP11.94□□□□□ -0.5
LINC00339-213ENST00000642137 AGTRAPQ6RW13 159 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms