RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 KLHL42Q9P2K6 505 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 ZNHIT2Q9UHR6 403 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 PNMA8BQ9ULN7 279 aaPredicted RBP9.18□□□□□ -0.94
PHGDH-228ENST00000641847 ACOT9Q9Y305 439 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 DHRS7Q9Y394 339 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 ACTL7BQ9Y614 415 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 LRBAP50851 2863 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 DOPEY1Q5JWR5 2465 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 CCDC187A0A096LP49 1063 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 C17orf113A0A1B0GUU1 675 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 CPED1A4D0V7 1026 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 TMX2-CTNND1H3BSU7 103 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 LIN7AO14910 233 aaPredicted RBP9.17□□□□□ -0.94
PHGDH-228ENST00000641847 GLRA3O75311 464 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 CCDC166P0CW27 439 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 CBSLP0DN79 551 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 BRAFP15056 766 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 CREB1P16220 341 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 VCLP18206 1134 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 HPDP32754 393 aaPredicted RBP9.17□□□□□ -0.94
PHGDH-228ENST00000641847 CBSP35520 551 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 CCR10P46092 362 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 PREPP48147 710 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 RGS4P49798 205 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 PPARDQ03181 441 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 SLC18A2Q05940 514 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 DMPKQ09013 629 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 HSPA14Q0VDF9 509 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 DLG1Q12959 904 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 CSHL1Q14406 222 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 NFE2L1Q14494 772 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 ZNF658BQ4V348 819 aaPredicted RBP9.17□□□□□ -0.94
PHGDH-228ENST00000641847 ZNF542PQ5EBM4 170 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 MANEAQ5SRI9 462 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 PLEKHS1Q5SXH7 462 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 ZCCHC8Q6NZY4 707 aaKnown RBP9.17□□□□□ -0.94
PHGDH-228ENST00000641847 FAM83HQ6ZRV2 1179 aaPredicted RBP9.17□□□□□ -0.94
PHGDH-228ENST00000641847 RD3Q7Z3Z2 195 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 PIWIL4Q7Z3Z4 852 aaKnown RBP9.17□□□□□ -0.94
PHGDH-228ENST00000641847 CFAP206Q8IYR0 622 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 PHACTR4Q8IZ21 702 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 CENPLQ8N0S6 344 aaPredicted RBP9.17□□□□□ -0.94
PHGDH-228ENST00000641847 PLD6Q8N2A8 252 aaKnown RBP9.17□□□□□ -0.94
PHGDH-228ENST00000641847 SPATA6LQ8N4H0 392 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 NKAPQ8N5F7 415 aaKnown RBP9.17□□□□□ -0.94
PHGDH-228ENST00000641847 LILRA3Q8N6C8 439 aaPredicted RBP9.17□□□□□ -0.94
PHGDH-228ENST00000641847 BANPQ8N9N5 519 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 EEF1AKMT1Q8WVE0 214 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 ANKRD49Q8WVL7 239 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 ASZ1Q8WWH4 475 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 GLMNQ92990 594 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 TMEM159Q96B96 161 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 ALKBH8Q96BT7 664 aaKnown RBP9.17□□□□□ -0.94
PHGDH-228ENST00000641847 LIN37Q96GY3 246 aaPredicted RBP9.17□□□□□ -0.94
PHGDH-228ENST00000641847 PSMG3-AS1Q96PY0 264 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 SELENOSQ9BQE4 189 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 UNKQ9C0B0 810 aaKnown RBP9.17□□□□□ -0.94
PHGDH-228ENST00000641847 ADNPQ9H2P0 1102 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 TCEAL2Q9H3H9 227 aaPredicted RBP9.17□□□□□ -0.94
PHGDH-228ENST00000641847 SSU72Q9NP77 194 aaKnown RBP9.17□□□□□ -0.94
PHGDH-228ENST00000641847 LATS2Q9NRM7 1088 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 GEMIN8Q9NWZ8 242 aaKnown RBP9.17□□□□□ -0.94
PHGDH-228ENST00000641847 DNAJC28Q9NX36 388 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 GULP1Q9UBP9 304 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 SLC23A2Q9UGH3 650 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 KCNK6Q9Y257 313 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 DNAJC16Q9Y2G8 782 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 PLEKHM1Q9Y4G2 1056 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 PCDHB11Q9Y5F2 797 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 DNMT3AQ9Y6K1 912 aaPredicted RBP9.17□□□□□ -0.94
PHGDH-228ENST00000641847 DGKBQ9Y6T7 804 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 NBASA2RRP1 2371 aa9.17□□□□□ -0.94
PHGDH-228ENST00000641847 ARID1BQ8NFD5 2236 aaPredicted RBP9.16□□□□□ -0.94
PHGDH-228ENST00000641847 SLC5A10A0PJK1 596 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 KLHL33A6NCF5 533 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 NPEPPSL1A6NEC2 478 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 MGAT4DA6NG13 374 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 EIF3FO00303 357 aaPredicted RBP9.16□□□□□ -0.94
PHGDH-228ENST00000641847 BTN3A1O00481 513 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 EFSO43281 561 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 TYROBPO43914 113 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 GPC4O75487 556 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 KLHL2O95198 593 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 TSPAN12O95859 305 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 TNFP01375 233 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 GSTA1P08263 222 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 LTA4HP09960 611 aaKnown RBP9.16□□□□□ -0.94
PHGDH-228ENST00000641847 ENO3P13929 434 aaPredicted RBP9.16□□□□□ -0.94
PHGDH-228ENST00000641847 CD1DP15813 335 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 CRHR1P34998 444 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 SLC26A3P40879 764 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 GLRBP48167 497 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 RPIAP49247 311 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 BLKP51451 505 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 KPNA2P52292 529 aaKnown RBP9.16□□□□□ -0.94
PHGDH-228ENST00000641847 HK3P52790 923 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 IL2P60568 153 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 ATP6V0D1P61421 351 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 HNRNPKP61978 463 aaKnown RBP eCLIP9.16□□□□□ -0.94
PHGDH-228ENST00000641847 EIF3IQ13347 325 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms