RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-230	ENST00000640657	KLHL21	Q9UJP4	597 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	POU2F3	Q9UKI9	436 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	ST3GAL5	Q9UNP4	418 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	MAB21L2	Q9Y586	359 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	HEMK1	Q9Y5R4	338 aa	Predicted RBP	4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	NRCAM	Q92823	1304 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657		A0A1B0GUL6	1792 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	TNRC6C	Q9HCJ0	1690 aa	Known RBP	4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	B4GALT5	O43286	388 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	RGS20	O76081	388 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	JUN	P05412	331 aa	Known RBP	4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	CD1D	P15813	335 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	CAPN3	P20807	821 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	PRPS1L1	P21108	318 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	FUT4	P22083	530 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	CFL1	P23528	166 aa	Known RBP	4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	STOM	P27105	288 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	DCT	P40126	519 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	MAPK8	P45983	427 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	MAPK9	P45984	424 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	MAP2K4	P45985	399 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	GPR15	P49685	360 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	NCS1	P62166	190 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	CYP4F2	P78329	520 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	IL10RB	Q08334	325 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	ADAM15	Q13444	863 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	TARBP2	Q15633	366 aa	Known RBP	4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	FAM174B	Q3ZCQ3	159 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	SYTL3	Q4VX76	610 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	C10orf62	Q5T681	223 aa	Predicted RBP	4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	PIK3R6	Q5UE93	754 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	MAP1S	Q66K74	1059 aa	Predicted RBP	4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	PIWIL3	Q7Z3Z3	882 aa	Known RBP	4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	RBFA	Q8N0V3	343 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	LSMEM2	Q8N112	164 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	LIX1	Q8N485	282 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	SLC37A3	Q8NCC5	494 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	MTMR14	Q8NCE2	650 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	OR10G2	Q8NGC3	310 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	UFD1	Q92890	307 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	SENP8	Q96LD8	212 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	TTLL2	Q9BWV7	592 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	ASPN	Q9BXN1	380 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	KCNN2	Q9H2S1	579 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	FBRSL1	Q9HCM7	1045 aa	Known RBP	4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	CD93	Q9NPY3	652 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	SNTG1	Q9NSN8	517 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	TRPM5	Q9NZQ8	1165 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	UXT	Q9UBK9	157 aa	Predicted RBP	4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	UBQLN2	Q9UHD9	624 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	HSPB11	Q9Y547	144 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	PCDHGA8	Q9Y5G5	932 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	KLK4	Q9Y5K2	254 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	UBR2	Q8IWV8	1755 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	ZNF831	Q5JPB2	1677 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	TOGARAM1	Q9Y4F4	1720 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	TSPAN4	O14817	238 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	XPNPEP2	O43895	674 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	PLOD3	O60568	738 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	ECI2	O75521	394 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	RECQL4	O94761	1208 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	GOT2	P00505	430 aa	Known RBP	4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	VTN	P04004	478 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	ITGB1	P05556	798 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	OR56A5	P0C7T3	313 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	IL1RN	P18510	177 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	GTF2E2	P29084	291 aa	Known RBP	4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	OR4D2	P58180	307 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	C1QTNF8	P60827	252 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	RPP38	P78345	283 aa	Known RBP	4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	CAMK1	Q14012	370 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	SF3B4	Q15427	424 aa	Known RBP eCLIP	4.92	□□□□□ -1.62	4e-12	■■□□□ 11.5
HNRNPU-230	ENST00000640657	GRIK4	Q16099	956 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	HSD17B12	Q53GQ0	312 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	ESCO2	Q56NI9	601 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	ATAD3C	Q5T2N8	411 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	GCNT6	Q5T4J0	391 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	LRRC66	Q68CR7	880 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	METTL2B	Q6P1Q9	378 aa	Known RBP	4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	RASSF6	Q6ZTQ3	369 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	USP51	Q70EK9	711 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	CREB3L2	Q70SY1	520 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	GET4	Q7L5D6	327 aa	Predicted RBP	4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	CXXC5	Q7LFL8	322 aa	Known RBP	4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	MICALL2	Q8IY33	904 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	METTL4	Q8N3J2	472 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	SPATA22	Q8NHS9	363 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	ASB15	Q8WXK1	588 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	UBE2E3	Q969T4	207 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	EXOC2	Q96KP1	924 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	FCRL2	Q96LA5	508 aa	Predicted RBP	4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	TMEM74	Q96NL1	305 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	SLC2A13	Q96QE2	648 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	GPR20	Q99678	358 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	SEMA3C	Q99985	751 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	RNF121	Q9H920	327 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	AGO3	Q9H9G7	860 aa	Known RBP	4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	QPCTL	Q9NXS2	382 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	SLC27A5	Q9Y2P5	690 aa		4.92	□□□□□ -1.62
HNRNPU-230	ENST00000640657	DYRK1B	Q9Y463	629 aa		4.92	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms