RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 HIST3H2AQ7L7L0 130 aa3□□□□□ -1.93
ATM-230ENST00000640388 TSPAN33Q86UF1 283 aa3□□□□□ -1.93
ATM-230ENST00000640388 FAM72BQ86X60 149 aa3□□□□□ -1.93
ATM-230ENST00000640388 KLHDC8BQ8IXV7 354 aa3□□□□□ -1.93
ATM-230ENST00000640388 PM20D2Q8IYS1 436 aa3□□□□□ -1.93
ATM-230ENST00000640388 NME8Q8N427 588 aa3□□□□□ -1.93
ATM-230ENST00000640388 GBGT1Q8N5D6 347 aa3□□□□□ -1.93
ATM-230ENST00000640388 NGEFQ8N5V2 710 aa3□□□□□ -1.93
ATM-230ENST00000640388 SLC5A8Q8N695 610 aa3□□□□□ -1.93
ATM-230ENST00000640388 ZBTB8BQ8NAP8 495 aaPredicted RBP3□□□□□ -1.93
ATM-230ENST00000640388 RBM15BQ8NDT2 890 aaKnown RBP3□□□□□ -1.93
ATM-230ENST00000640388 PPP4R1Q8TF05 950 aa3□□□□□ -1.93
ATM-230ENST00000640388 USP6NLQ92738 828 aa3□□□□□ -1.93
ATM-230ENST00000640388 OXNAD1Q96HP4 312 aaPredicted RBP3□□□□□ -1.93
ATM-230ENST00000640388 ZNF354BQ96LW1 612 aa3□□□□□ -1.93
ATM-230ENST00000640388 NUDCD1Q96RS6 583 aa3□□□□□ -1.93
ATM-230ENST00000640388 GAD1Q99259 594 aa3□□□□□ -1.93
ATM-230ENST00000640388 FTOQ9C0B1 505 aaKnown RBP eCLIP3□□□□□ -1.93
ATM-230ENST00000640388 TRPC7Q9HCX4 862 aa3□□□□□ -1.93
ATM-230ENST00000640388 DBNLQ9UJU6 430 aaKnown RBP3□□□□□ -1.93
ATM-230ENST00000640388 TCF19Q9Y242 345 aa3□□□□□ -1.93
ATM-230ENST00000640388 B3GALT5Q9Y2C3 310 aa3□□□□□ -1.93
ATM-230ENST00000640388 OTOFQ9HC10 1997 aa3□□□□□ -1.93
ATM-230ENST00000640388 PCNX1Q96RV3 2341 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 MAP3K19Q56UN5 1328 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 RPGRIP1LQ68CZ1 1315 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 CREBBPQ92793 2442 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 FRMD3A2A2Y4 597 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 PI4KAP2A4QPH2 592 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 C5orf60A6NFR6 353 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 PGPEP1LA6NFU8 196 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 ANKRD66B4E2M5 251 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 SMAD9O15198 467 aaKnown RBP2.99□□□□□ -1.93
ATM-230ENST00000640388 OGG1O15527 345 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 HS6ST1O60243 411 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 CTSVO60911 334 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 WISP2O76076 250 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 IGHV4-39P01824 125 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 AMBPP02760 352 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 PRB1P04280 392 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 KRT19P08727 400 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 CSF2RAP15509 400 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 BDNFP23560 247 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 HRH2P25021 359 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 ACADLP28330 430 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 MAPK4P31152 587 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 CDKN1AP38936 164 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 MSH2P43246 934 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 GPR143P51810 404 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 MLLT10P55197 1068 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 IKQ13123 557 aaPredicted RBP2.99□□□□□ -1.93
ATM-230ENST00000640388 RBM39Q14498 530 aaKnown RBP2.99□□□□□ -1.93
ATM-230ENST00000640388 CRYMQ14894 314 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 CCNYL2Q5T2Q4 361 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 TMEM154Q6P9G4 183 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 PLXDC2Q6UX71 529 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 GSG1LQ6UXU4 331 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 CLEC17AQ6ZS10 378 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 PIWIL4Q7Z3Z4 852 aaKnown RBP2.99□□□□□ -1.93
ATM-230ENST00000640388 TEX11Q8IYF3 940 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 HACE1Q8IYU2 909 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 TMTC2Q8N394 836 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 WDTC1Q8N5D0 677 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 GCSAMQ8N6F7 178 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 ANKRD52Q8NB46 1076 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 SLC38A9Q8NBW4 561 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 PPHLN1Q8NEY8 458 aaKnown RBP2.99□□□□□ -1.93
ATM-230ENST00000640388 RDM1Q8NG50 284 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 TRPC4APQ8TEL6 797 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 SCFD2Q8WU76 684 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 BADQ92934 168 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 STAMBPL1Q96FJ0 436 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 NEUROD6Q96NK8 337 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 OR2A14Q96R47 310 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 PLK3Q9H4B4 646 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 TFB2MQ9H5Q4 396 aaKnown RBP2.99□□□□□ -1.93
ATM-230ENST00000640388 SEPT11Q9NVA2 429 aaKnown RBP2.99□□□□□ -1.93
ATM-230ENST00000640388 GAB2Q9UQC2 676 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 LYVE1Q9Y5Y7 322 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 MTCH2Q9Y6C9 303 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 SESN1Q9Y6P5 492 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 NF1P21359 2839 aa2.99□□□□□ -1.93
ATM-230ENST00000640388 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.98□□□□□ -1.93
ATM-230ENST00000640388 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.98□□□□□ -1.93
ATM-230ENST00000640388 PRSS47A8MTI9 375 aa2.98□□□□□ -1.93
ATM-230ENST00000640388 F5H0A9 414 aaPredicted RBP2.98□□□□□ -1.93
ATM-230ENST00000640388 TMEM189-UBE2V1I3L0A0 370 aa2.98□□□□□ -1.93
ATM-230ENST00000640388 J3QR06 171 aa2.98□□□□□ -1.93
ATM-230ENST00000640388 BUD23O43709 281 aaKnown RBP2.98□□□□□ -1.93
ATM-230ENST00000640388 ZNF217O75362 1048 aa2.98□□□□□ -1.93
ATM-230ENST00000640388 OR2C1O95371 312 aa2.98□□□□□ -1.93
ATM-230ENST00000640388 BMP10O95393 424 aa2.98□□□□□ -1.93
ATM-230ENST00000640388 BAG4O95429 457 aaKnown RBP2.98□□□□□ -1.93
ATM-230ENST00000640388 SCGB1D1O95968 90 aa2.98□□□□□ -1.93
ATM-230ENST00000640388 TFAP2AP05549 437 aa2.98□□□□□ -1.93
ATM-230ENST00000640388 CENPBP07199 599 aaPredicted RBP2.98□□□□□ -1.93
ATM-230ENST00000640388 CLTBP09497 229 aa2.98□□□□□ -1.93
ATM-230ENST00000640388 CFC1BP0CG36 223 aa2.98□□□□□ -1.93
ATM-230ENST00000640388 CFC1P0CG37 223 aa2.98□□□□□ -1.93
ATM-230ENST00000640388 ACADMP11310 421 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms