RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 GOLGA8HP0CJ92 632 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 SMIM10L2AP0DMW4 78 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 SMIM10L2BP0DMW5 78 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 SCG2P13521 617 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 TRIM21P19474 475 aaKnown RBP2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 KCNA5P22460 613 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 DNAJB1P25685 340 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 CALML3P27482 149 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 CHATP28329 748 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 ACADLP28330 430 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 ARRB2P32121 409 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 DCTDP32321 178 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 TNFSF8P32971 234 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 CAPZA2P47755 286 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 LIG4P49917 911 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 CLCN3P51790 818 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 PPP5CP53041 499 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 RAD23AP54725 363 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 TAS2R40P59535 323 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 KRT83P78385 493 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 TROAPQ12815 778 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 COASYQ13057 564 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 ITGADQ13349 1161 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 LPIN1Q14693 890 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 PLCB4Q15147 1175 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 MCMDC2Q4G0Z9 681 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 CDONQ4KMG0 1287 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 TCEAL5Q5H9L2 206 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 CELF3Q5SZQ8 465 aaKnown RBP2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 MARCH8Q5T0T0 291 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 RARS2Q5T160 578 aaKnown RBP2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 HECTD3Q5T447 861 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 ERMARDQ5T6L9 678 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 CAPRIN2Q6IMN6 1127 aaKnown RBP2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 CES5AQ6NT32 575 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 METTL7BQ6UX53 244 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 QSOX2Q6ZRP7 698 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 CLEC17AQ6ZS10 378 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 TSPAN33Q86UF1 283 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 ANKRD13BQ86YJ7 626 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 EPHX4Q8IUS5 362 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 MCEMP1Q8IX19 187 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 RBFAQ8N0V3 343 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 MINDY1Q8N5J2 469 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 PARP16Q8N5Y8 322 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 ZBTB2Q8N680 514 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 HORMAD2Q8N7B1 307 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 LRRC57Q8N9N7 239 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 TEX45Q8NA69 505 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 HJURPQ8NCD3 748 aaPredicted RBP2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 APPL2Q8NEU8 664 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 PRSS33Q8NF86 280 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 DBF4BQ8NFT6 615 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 VN1R2Q8NFZ6 395 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 HUS1BQ8NHY5 278 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 GSDMBQ8TAX9 411 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 BICD2Q8TD16 824 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 DUSP19Q8WTR2 217 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 CRYGNQ8WXF5 182 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 SUSD6Q92537 303 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 EME1Q96AY2 570 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 ZNF653Q96CK0 615 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 TMCO6Q96DC7 493 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 PGAP3Q96FM1 320 aaPredicted RBP2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 PPP1R13BQ96KQ4 1090 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 HARBI1Q96MB7 349 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 FSD1Q9BTV5 496 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 KIFC3Q9BVG8 833 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 SCNM1Q9BWG6 230 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 IFIH1Q9BYX4 1025 aaKnown RBP2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 KLHL4Q9C0H6 718 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 B3GNT4Q9C0J1 378 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 HRH4Q9H3N8 390 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 CHMP4BQ9H444 224 aaKnown RBP2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 KLHL31Q9H511 634 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 THSD1Q9NS62 852 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 TMEM45AQ9NWC5 275 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 ARHGEF38Q9NXL2 777 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 PSD3Q9NYI0 1048 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 TAB2Q9NYJ8 693 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 CWC15Q9P013 229 aaKnown RBP2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 C5AR2Q9P296 337 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 MAD2L2Q9UI95 211 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 ANAPC2Q9UJX6 822 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 CMAHPQ9Y471 501 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 NFE2L3Q9Y4A8 694 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 CCL27Q9Y4X3 112 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 NID2Q14112 1375 aa2.47□□□□□ -2.01
SMARCB1-208ENST00000634926 ASH1LQ9NR48 2969 aaKnown RBP2.46□□□□□ -2.01
SMARCB1-208ENST00000634926 ZFYVE26Q68DK2 2539 aa2.46□□□□□ -2.01
SMARCB1-208ENST00000634926 IGKV6D-21A0A0A0MT36 114 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 A0A1B0GVM2 712 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 A0A1B0GVY2 172 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 TCRBV21S2A2A0A5A6 115 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 TMEM202A6NGA9 273 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 LRRC72A6NJI9 287 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 RSPH10B2B2RC85 870 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 AKR1B15C9JRZ8 316 aaPredicted RBP2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 H3BQ06 376 aaPredicted RBP2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 MEIS2O14770 477 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms