RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 ACPPP15309 386 aa13.3□□□□□ -0.28
SNX1-214ENST00000625244 CCNCP24863 283 aa13.3□□□□□ -0.28
SNX1-214ENST00000625244 MMRN1Q13201 1228 aa13.3□□□□□ -0.28
SNX1-214ENST00000625244 DSG2Q14126 1118 aa13.3□□□□□ -0.28
SNX1-214ENST00000625244 FILIP1LQ4L180 1135 aa13.3□□□□□ -0.28
SNX1-214ENST00000625244 KRTCAP3Q53RY4 240 aa13.3□□□□□ -0.28
SNX1-214ENST00000625244 LDLRAP1Q5SW96 308 aa13.3□□□□□ -0.28
SNX1-214ENST00000625244 GPRC6AQ5T6X5 926 aa13.3□□□□□ -0.28
SNX1-214ENST00000625244 HIBCHQ6NVY1 386 aaPredicted RBP13.3□□□□□ -0.28
SNX1-214ENST00000625244 HOOK3Q86VS8 718 aa13.3□□□□□ -0.28
SNX1-214ENST00000625244 AMIGO1Q86WK6 493 aa13.3□□□□□ -0.28
SNX1-214ENST00000625244 DNAJC22Q8N4W6 341 aa13.3□□□□□ -0.28
SNX1-214ENST00000625244 AMER2Q8N7J2 671 aa13.3□□□□□ -0.28
SNX1-214ENST00000625244 PHC3Q8NDX5 983 aa13.3□□□□□ -0.28
SNX1-214ENST00000625244 SUN3Q8TAQ9 357 aa13.3□□□□□ -0.28
SNX1-214ENST00000625244 NUDT8Q8WV74 236 aa13.3□□□□□ -0.28
SNX1-214ENST00000625244 FATE1Q969F0 183 aa13.3□□□□□ -0.28
SNX1-214ENST00000625244 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.3□□□□□ -0.28
SNX1-214ENST00000625244 RBM41Q96IZ5 413 aaKnown RBP13.3□□□□□ -0.28
SNX1-214ENST00000625244 TSGA13Q96PP4 275 aa13.3□□□□□ -0.28
SNX1-214ENST00000625244 ALPK1Q96QP1 1244 aa13.3□□□□□ -0.28
SNX1-214ENST00000625244 VKORC1Q9BQB6 163 aa13.3□□□□□ -0.28
SNX1-214ENST00000625244 UCK2Q9BZX2 261 aa13.3□□□□□ -0.28
SNX1-214ENST00000625244 CHRNA10Q9GZZ6 450 aa13.3□□□□□ -0.28
SNX1-214ENST00000625244 HAUS2Q9NVX0 235 aa13.3□□□□□ -0.28
SNX1-214ENST00000625244 DNAJB12Q9NXW2 375 aaKnown RBP13.3□□□□□ -0.28
SNX1-214ENST00000625244 TAB2Q9NYJ8 693 aa13.3□□□□□ -0.28
SNX1-214ENST00000625244 COQ3Q9NZJ6 369 aa13.3□□□□□ -0.28
SNX1-214ENST00000625244 PLEKHA6Q9Y2H5 1048 aa13.3□□□□□ -0.28
SNX1-214ENST00000625244 ANK2Q01484 3957 aa13.3□□□□□ -0.28
SNX1-214ENST00000625244 HCFC1P51610 2035 aa13.29□□□□□ -0.28
SNX1-214ENST00000625244 VSTM2BA6NLU5 285 aa13.29□□□□□ -0.28
SNX1-214ENST00000625244 TMCO5BA8MYB1 307 aa13.29□□□□□ -0.28
SNX1-214ENST00000625244 NPIPA5E9PKD4 350 aa13.29□□□□□ -0.28
SNX1-214ENST00000625244 MAP2K7O14733 419 aa13.29□□□□□ -0.28
SNX1-214ENST00000625244 PROM1O43490 865 aa13.29□□□□□ -0.28
SNX1-214ENST00000625244 ZRANB2O95218 330 aaKnown RBP eCLIP13.29□□□□□ -0.28
SNX1-214ENST00000625244 UGT2B7P16662 529 aa13.29□□□□□ -0.28
SNX1-214ENST00000625244 MSX1P28360 303 aa13.29□□□□□ -0.28
SNX1-214ENST00000625244 ADSLP30566 484 aaPredicted RBP13.29□□□□□ -0.28
SNX1-214ENST00000625244 PCK1P35558 622 aa13.29□□□□□ -0.28
SNX1-214ENST00000625244 MYBPHQ13203 477 aa13.29□□□□□ -0.28
SNX1-214ENST00000625244 OLIG2Q13516 323 aa13.29□□□□□ -0.28
SNX1-214ENST00000625244 KRT31Q15323 416 aa13.29□□□□□ -0.28
SNX1-214ENST00000625244 IFI16Q16666 785 aaKnown RBP13.29□□□□□ -0.28
SNX1-214ENST00000625244 BOLA3Q53S33 107 aa13.29□□□□□ -0.28
SNX1-214ENST00000625244 ATG9BQ674R7 924 aa13.29□□□□□ -0.28
SNX1-214ENST00000625244 FAM151BQ6UXP7 276 aa13.29□□□□□ -0.28
SNX1-214ENST00000625244 CHERPQ8IWX8 916 aaKnown RBP13.29□□□□□ -0.28
SNX1-214ENST00000625244 CFAP206Q8IYR0 622 aa13.29□□□□□ -0.28
SNX1-214ENST00000625244 CNTD1Q8N815 330 aa13.29□□□□□ -0.28
SNX1-214ENST00000625244 WFDC11Q8NEX6 87 aa13.29□□□□□ -0.28
SNX1-214ENST00000625244 C18orf12Q96KH6 178 aa13.29□□□□□ -0.28
SNX1-214ENST00000625244 OR2A14Q96R47 310 aa13.29□□□□□ -0.28
SNX1-214ENST00000625244 CRB3Q9BUF7 120 aa13.29□□□□□ -0.28
SNX1-214ENST00000625244 RNF32Q9H0A6 362 aa13.29□□□□□ -0.28
SNX1-214ENST00000625244 CBX8Q9HC52 389 aa13.29□□□□□ -0.28
SNX1-214ENST00000625244 ZNF358Q9NW07 568 aa13.29□□□□□ -0.28
SNX1-214ENST00000625244 NXT1Q9UKK6 140 aaKnown RBP13.29□□□□□ -0.28
SNX1-214ENST00000625244 NPIPA1Q9UND3 350 aa13.29□□□□□ -0.28
SNX1-214ENST00000625244 NSG1A0A0A6YYJ2 146 aa13.28□□□□□ -0.28
SNX1-214ENST00000625244 OR5H15A6NDH6 313 aa13.28□□□□□ -0.28
SNX1-214ENST00000625244 TOXO94900 526 aa13.28□□□□□ -0.28
SNX1-214ENST00000625244 BMP10O95393 424 aa13.28□□□□□ -0.28
SNX1-214ENST00000625244 SERPINC1P01008 464 aa13.28□□□□□ -0.28
SNX1-214ENST00000625244 SERPINA7P05543 415 aa13.28□□□□□ -0.28
SNX1-214ENST00000625244 HOXD4P09016 255 aaPredicted RBP13.28□□□□□ -0.28
SNX1-214ENST00000625244 CD48P09326 243 aa13.28□□□□□ -0.28
SNX1-214ENST00000625244 INHBBP09529 407 aa13.28□□□□□ -0.28
SNX1-214ENST00000625244 PIM1P11309 404 aaPredicted RBP13.28□□□□□ -0.28
SNX1-214ENST00000625244 COX6A1P12074 109 aa13.28□□□□□ -0.28
SNX1-214ENST00000625244 FDXRP22570 491 aa13.28□□□□□ -0.28
SNX1-214ENST00000625244 NSG1P42857 185 aa13.28□□□□□ -0.28
SNX1-214ENST00000625244 OR1D4P47884 311 aa13.28□□□□□ -0.28
SNX1-214ENST00000625244 HSF1Q00613 529 aa13.28□□□□□ -0.28
SNX1-214ENST00000625244 KLC1Q07866 573 aa13.28□□□□□ -0.28
SNX1-214ENST00000625244 PRKG2Q13237 762 aa13.28□□□□□ -0.28
SNX1-214ENST00000625244 PPP2R5EQ16537 467 aa13.28□□□□□ -0.28
SNX1-214ENST00000625244 PCSK7Q16549 785 aa13.28□□□□□ -0.28
SNX1-214ENST00000625244 LONRF2Q1L5Z9 754 aa13.28□□□□□ -0.28
SNX1-214ENST00000625244 TFDP3Q5H9I0 405 aa13.28□□□□□ -0.28
SNX1-214ENST00000625244 ZNF766Q5HY98 468 aa13.28□□□□□ -0.28
SNX1-214ENST00000625244 CCDC122Q5T0U0 273 aa13.28□□□□□ -0.28
SNX1-214ENST00000625244 NCBP2-AS2Q69YL0 99 aa13.28□□□□□ -0.28
SNX1-214ENST00000625244 NDUFAF7Q7L592 441 aa13.28□□□□□ -0.28
SNX1-214ENST00000625244 NT5DC3Q86UY8 548 aa13.28□□□□□ -0.28
SNX1-214ENST00000625244 LUZP1Q86V48 1076 aa13.28□□□□□ -0.28
SNX1-214ENST00000625244 DTWD1Q8N5C7 304 aa13.28□□□□□ -0.28
SNX1-214ENST00000625244 METTL27Q8N6F8 245 aaPredicted RBP13.28□□□□□ -0.28
SNX1-214ENST00000625244 FLVCR1-AS1Q8TAF5 88 aa13.28□□□□□ -0.28
SNX1-214ENST00000625244 DLG3Q92796 817 aa13.28□□□□□ -0.28
SNX1-214ENST00000625244 EURLQ9NYK6 297 aa13.28□□□□□ -0.28
SNX1-214ENST00000625244 LIMA1Q9UHB6 759 aaKnown RBP13.28□□□□□ -0.28
SNX1-214ENST00000625244 PLCL2Q9UPR0 1127 aa13.28□□□□□ -0.28
SNX1-214ENST00000625244 FAM90A27PA6NNH2 459 aa13.27□□□□□ -0.29
SNX1-214ENST00000625244 GAPDHSO14556 408 aaPredicted RBP13.27□□□□□ -0.29
SNX1-214ENST00000625244 CTAG2O75638 210 aa13.27□□□□□ -0.29
SNX1-214ENST00000625244 WFS1O76024 890 aa13.27□□□□□ -0.29
SNX1-214ENST00000625244 HEXAP06865 529 aa13.27□□□□□ -0.29
SNX1-214ENST00000625244 UQCRHP07919 91 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms