RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, human

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00963-215	ENST00000622972	CRTAM	O95727	393 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	ERVK-10	P10266	1014 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	BRAF	P15056	766 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	ZNF7	P17097	686 aa	Predicted RBP	5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	WT1	P19544	449 aa	Predicted RBP	5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	IDS	P22304	550 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	LOR	P23490	312 aa	Predicted RBP	5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	ACRV1	P26436	265 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	RPL10	P27635	214 aa	Known RBP	5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	MAP4	P27816	1152 aa	Known RBP	5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	PBLD	P30039	288 aa	Predicted RBP	5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	SSTR1	P30872	391 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	TSPAN7	P41732	249 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	HAL	P42357	657 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	SLC1A2	P43004	574 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	CCR10	P46092	362 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	NPY2R	P49146	381 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	LMAN1	P49257	510 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	DRG2	P55039	364 aa	Known RBP	5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	PLTP	P55058	493 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	MC2R	Q01718	297 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	PDIA2	Q13087	525 aa	Known RBP	5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	SQSTM1	Q13501	440 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	TYSND1	Q2T9J0	566 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	TEX35	Q5T0J7	233 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	IRGC	Q6NXR0	463 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	WDR74	Q6RFH5	385 aa	Predicted RBP	5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	DET1	Q7L5Y6	550 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	PTRH1	Q86Y79	214 aa	Known RBP	5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	TRAPPC5	Q8IUR0	188 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	RASGRP3	Q8IV61	690 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	RAVER1	Q8IY67	606 aa	Known RBP	5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	FBXO36	Q8NEA4	188 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	PPHLN1	Q8NEY8	458 aa	Known RBP	5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	GIMAP7	Q8NHV1	300 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	ZNF398	Q8TD17	642 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	STYX	Q8WUJ0	223 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	LPGAT1	Q92604	370 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	LRRC45	Q96CN5	670 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	STAMBPL1	Q96FJ0	436 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	ELMO2	Q96JJ3	720 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	C9orf72	Q96LT7	481 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	RUNDC3B	Q96NL0	473 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	BIRC8	Q96P09	236 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	CATSPER2	Q96P56	530 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	TGM7	Q96PF1	710 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	PPP1R2P1	Q96PQ5	205 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	SRPK1	Q96SB4	655 aa	Known RBP	5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	MDFI	Q99750	246 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	EBNA1BP2	Q99848	306 aa	Known RBP	5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	C19orf43	Q9BQ61	176 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	FERMT1	Q9BQL6	677 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	ZPBP	Q9BS86	351 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	ULBP3	Q9BZM4	244 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	IL22	Q9GZX6	179 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	SLC25A18	Q9H1K4	315 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	P2RY12	Q9H244	342 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	TRIT1	Q9H3H1	467 aa	Known RBP	5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	EPB41L1	Q9H4G0	881 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	ASB8	Q9H765	288 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	APMAP	Q9HDC9	416 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	NINJ2	Q9NZG7	142 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	NFU1	Q9UMS0	254 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	CDYL	Q9Y232	598 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	SDK2	Q58EX2	2172 aa		5.73	□□□□□ -1.49
LINC00963-215	ENST00000622972	HEATR5B	Q9P2D3	2071 aa		5.72	□□□□□ -1.49
LINC00963-215	ENST00000622972	LOC101059948	A0A1B0GTJ6	334 aa		5.72	□□□□□ -1.49
LINC00963-215	ENST00000622972	HMX2	A2RU54	273 aa		5.72	□□□□□ -1.49
LINC00963-215	ENST00000622972	LILRA5	A6NI73	299 aa		5.72	□□□□□ -1.49
LINC00963-215	ENST00000622972	SDR42E2	A6NKP2	422 aa		5.72	□□□□□ -1.49
LINC00963-215	ENST00000622972	OR2AG2	A6NM03	316 aa		5.72	□□□□□ -1.49
LINC00963-215	ENST00000622972	C2orf81	A6NN90	581 aa		5.72	□□□□□ -1.49
LINC00963-215	ENST00000622972	IQCF5	A8MTL0	148 aa		5.72	□□□□□ -1.49
LINC00963-215	ENST00000622972	GPR89A	B7ZAQ6	455 aa		5.72	□□□□□ -1.49
LINC00963-215	ENST00000622972		M0R082	166 aa		5.72	□□□□□ -1.49
LINC00963-215	ENST00000622972	EREG	O14944	169 aa		5.72	□□□□□ -1.49
LINC00963-215	ENST00000622972	NKX2-8	O15522	239 aa		5.72	□□□□□ -1.49
LINC00963-215	ENST00000622972	VEGFD	O43915	354 aa		5.72	□□□□□ -1.49
LINC00963-215	ENST00000622972	CPNE3	O75131	537 aa	Known RBP	5.72	□□□□□ -1.49
LINC00963-215	ENST00000622972	NIPSNAP2	O75323	286 aa		5.72	□□□□□ -1.49
LINC00963-215	ENST00000622972	KATNA1	O75449	491 aa		5.72	□□□□□ -1.49
LINC00963-215	ENST00000622972	FAM155B	O75949	473 aa		5.72	□□□□□ -1.49
LINC00963-215	ENST00000622972	USP1	O94782	785 aa		5.72	□□□□□ -1.49
LINC00963-215	ENST00000622972	GPR89B	P0CG08	455 aa		5.72	□□□□□ -1.49
LINC00963-215	ENST00000622972	TPBGL	P0DKB5	382 aa		5.72	□□□□□ -1.49
LINC00963-215	ENST00000622972	EDN3	P14138	238 aa		5.72	□□□□□ -1.49
LINC00963-215	ENST00000622972	PGAM1	P18669	254 aa		5.72	□□□□□ -1.49
LINC00963-215	ENST00000622972	TCN2	P20062	427 aa		5.72	□□□□□ -1.49
LINC00963-215	ENST00000622972	GCA	P28676	217 aa		5.72	□□□□□ -1.49
LINC00963-215	ENST00000622972	AKT1	P31749	480 aa		5.72	□□□□□ -1.49
LINC00963-215	ENST00000622972	ARL4D	P49703	201 aa		5.72	□□□□□ -1.49
LINC00963-215	ENST00000622972	GFER	P55789	205 aa		5.72	□□□□□ -1.49
LINC00963-215	ENST00000622972	POLE2	P56282	527 aa		5.72	□□□□□ -1.49
LINC00963-215	ENST00000622972	VSNL1	P62760	191 aa		5.72	□□□□□ -1.49
LINC00963-215	ENST00000622972	MC1R	Q01726	317 aa		5.72	□□□□□ -1.49
LINC00963-215	ENST00000622972	CACNG1	Q06432	222 aa		5.72	□□□□□ -1.49
LINC00963-215	ENST00000622972	TMEM115	Q12893	351 aa	Predicted RBP	5.72	□□□□□ -1.49
LINC00963-215	ENST00000622972	KCNAB2	Q13303	367 aa		5.72	□□□□□ -1.49
LINC00963-215	ENST00000622972	CTBP1	Q13363	440 aa		5.72	□□□□□ -1.49

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