RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 ERP27Q96DN0 273 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 DPH7Q9BTV6 452 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 MVB12BQ9H7P6 319 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 ZNF556Q9HAH1 456 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 NLE1Q9NVX2 485 aaPredicted RBP8.88□□□□□ -0.99
HDAC9-229ENST00000622668 CLEC1BQ9P126 229 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 POLR1DQ9Y2S0 133 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 USH1CQ9Y6N9 552 aa8.88□□□□□ -0.99
HDAC9-229ENST00000622668 ZFHX2Q9C0A1 2572 aaPredicted RBP8.88□□□□□ -0.99
HDAC9-229ENST00000622668 PRKAR1AP10644 381 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 JAK1P23458 1154 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 CCND1P24385 295 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 GDF5P43026 501 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 YPEL5P62699 121 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 MEF2AQ02078 507 aaPredicted RBP8.87□□□□□ -0.99
HDAC9-229ENST00000622668 ZSCAN26Q16670 478 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 R3HCC1LQ7Z5L2 792 aaKnown RBP8.87□□□□□ -0.99
HDAC9-229ENST00000622668 GPR180Q86V85 440 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 GBP7Q8N8V2 638 aaPredicted RBP8.87□□□□□ -0.99
HDAC9-229ENST00000622668 SNIP1Q8TAD8 396 aaKnown RBP8.87□□□□□ -0.99
HDAC9-229ENST00000622668 SPOCK2Q92563 424 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 CDC6Q99741 560 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 EFCAB11Q9BUY7 163 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 ROGDIQ9GZN7 287 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 THAP1Q9NVV9 213 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 UBXN7O94888 489 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 IFNA14P01570 189 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 RPLP0P05388 317 aaKnown RBP8.87□□□□□ -0.99
HDAC9-229ENST00000622668 RYKP34925 604 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 OPRD1P41143 372 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 RPL14P50914 215 aaKnown RBP8.87□□□□□ -0.99
HDAC9-229ENST00000622668 ADPRHP54922 357 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 GTF2H2Q13888 395 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 LRP8Q14114 963 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 GTF2H2CQ6P1K8 395 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 TMEM74Q96NL1 305 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 SH3GL1Q99961 368 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 TBCDQ9BTW9 1192 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 OR8D2Q9GZM6 311 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 SPO11Q9Y5K1 396 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 ARAP2Q8WZ64 1704 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 RGSL1A5PLK6 1076 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 TK2O00142 265 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 PSMD11O00231 422 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 CDC7O00311 574 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 SLC28A1O00337 649 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 YKT6O15498 198 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 FOXD2O60548 495 aaPredicted RBP8.87□□□□□ -0.99
HDAC9-229ENST00000622668 EEF1B2P24534 225 aaKnown RBP8.87□□□□□ -0.99
HDAC9-229ENST00000622668 RBM20Q5T481 1227 aaKnown RBP8.87□□□□□ -0.99
HDAC9-229ENST00000622668 DPPA4Q7L190 304 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 KRT73Q86Y46 540 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 LIX1Q8N485 282 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 DEFB124Q8NES8 71 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 ADCY4Q8NFM4 1077 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 TTLQ8NG68 377 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 PTCHD1Q96NR3 888 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 RMI1Q9H9A7 625 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 IL26Q9NPH9 171 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 TAAR2Q9P1P5 351 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 STX18Q9P2W9 335 aaKnown RBP8.87□□□□□ -0.99
HDAC9-229ENST00000622668 FZD4Q9ULV1 537 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 FADS3Q9Y5Q0 445 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 ACTL7BQ9Y614 415 aa8.87□□□□□ -0.99
HDAC9-229ENST00000622668 TRPM7Q96QT4 1865 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 CCDC154A6NI56 674 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 FAM227AF5H4B4 570 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 K7EPI3 171 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 OR4F21O95013 312 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 EPN2O95208 641 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 SHBGP04278 402 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 CAPN1P07384 714 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 GABRG2P18507 467 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 CCKBRP32239 447 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 IGFALSP35858 605 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 TMIGD1Q6UXZ0 262 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 PATL1Q86TB9 770 aaKnown RBP8.86□□□□□ -0.99
HDAC9-229ENST00000622668 GPR26Q8NDV2 337 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 PJA1Q8NG27 643 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 OR6C4Q8NGE1 309 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 THAP3Q8WTV1 239 aaPredicted RBP8.86□□□□□ -0.99
HDAC9-229ENST00000622668 PANX1Q96RD7 426 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 HEY2Q9UBP5 337 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 ADAM21Q9UKJ8 722 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 KLHL20Q9Y2M5 609 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 ARL2BPQ9Y2Y0 163 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 GFRA3O60609 400 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 SLC25A12O75746 678 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 FAM107AO95990 144 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 PENKP01210 267 aaPredicted RBP8.86□□□□□ -0.99
HDAC9-229ENST00000622668 CNR2P34972 360 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 OASLQ15646 514 aaKnown RBP8.86□□□□□ -0.99
HDAC9-229ENST00000622668 WSCD2Q2TBF2 565 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 LIPMQ5VYY2 423 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 CXorf57Q6NSI4 855 aaKnown RBP8.86□□□□□ -0.99
HDAC9-229ENST00000622668 NLRP14Q86W24 1093 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 OR5M3Q8NGP4 307 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 ZNF563Q8TA94 476 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 XAGE5Q8WWM1 108 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 PLEKHG4BQ96PX9 1271 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms