RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 A0A0J9YYE9 177 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 LDB2O43679 373 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 TBX18O95935 607 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 BMP1P13497 986 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 POU2F1P14859 743 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 POU3F3P20264 500 aaPredicted RBP12.2□□□□□ -0.46
LITAF-221ENST00000622633 ATP6V1B2P21281 511 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 HTR1BP28222 390 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 FOXA1P55317 472 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 TBX4P57082 545 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 HERVK_113P63132 956 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 TIAL1Q01085 375 aaKnown RBP eCLIP12.2□□□□□ -0.465e-7■□□□□ 11.1
LITAF-221ENST00000622633 SCRN3Q0VDG4 424 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 RIN1Q13671 783 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 GRB7Q14451 532 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 ZNF181Q2M3W8 571 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 SLC39A12Q504Y0 691 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 NXNL2Q5VZ03 156 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 DPY19L3Q6ZPD9 716 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 PRSS42Q7Z5A4 293 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 FAM124AQ86V42 546 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 BBS7Q8IWZ6 715 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 ZNF683Q8IZ20 524 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 SLC22A15Q8IZD6 547 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 PIK3C3Q8NEB9 887 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 ARRDC2Q8TBH0 407 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 PBXIP1Q96AQ6 731 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 SLC45A3Q96JT2 553 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 NSUN5Q96P11 429 aaKnown RBP12.2□□□□□ -0.46
LITAF-221ENST00000622633 KCNA7Q96RP8 456 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 UHRF1Q96T88 793 aaPredicted RBP12.2□□□□□ -0.46
LITAF-221ENST00000622633 ERVK-6Q9BXR3 956 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 ZYG11BQ9C0D3 744 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 TOR3AQ9H497 397 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 MID1IP1Q9NPA3 183 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 POLR3BQ9NW08 1133 aaPredicted RBP12.2□□□□□ -0.46
LITAF-221ENST00000622633 MAP10Q9P2G4 905 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 Q9Y3F1 56 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 COL4A4P53420 1690 aaPredicted RBP12.2□□□□□ -0.46
LITAF-221ENST00000622633 UBXN8O00124 270 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 ATXN1LP0C7T5 689 aaKnown RBP12.2□□□□□ -0.46
LITAF-221ENST00000622633 PIRTP0C851 137 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 SLC2A3P11169 496 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 CYP2A6P11509 494 aaPredicted RBP12.2□□□□□ -0.46
LITAF-221ENST00000622633 CD1DP15813 335 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 RHOQP17081 205 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 THPOP40225 353 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 NRG1Q02297 640 aaPredicted RBP12.2□□□□□ -0.46
LITAF-221ENST00000622633 EFEMP1Q12805 493 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 CSTF3Q12996 717 aaKnown RBP12.2□□□□□ -0.46
LITAF-221ENST00000622633 TUSC3Q13454 348 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 GALEQ14376 348 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 OR4D1Q15615 310 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 PFKFB4Q16877 469 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 GEN1Q17RS7 908 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 MS4A13Q5J8X5 152 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 CIR1Q86X95 450 aaPredicted RBP12.2□□□□□ -0.46
LITAF-221ENST00000622633 GLB1L3Q8NCI6 653 aaPredicted RBP12.2□□□□□ -0.46
LITAF-221ENST00000622633 ZBTB44Q8NCP5 570 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 FAM83FQ8NEG4 500 aaPredicted RBP12.2□□□□□ -0.46
LITAF-221ENST00000622633 BLOC1S5Q8TDH9 187 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 GPR152Q8TDT2 470 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 FOXJ1Q92949 421 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 IGSF8Q969P0 613 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 NRBF2Q96F24 287 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 SUSD3Q96L08 255 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 ADAM2Q99965 735 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 TSEN34Q9BSV6 310 aaKnown RBP12.2□□□□□ -0.46
LITAF-221ENST00000622633 CDADC1Q9BWV3 514 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 PRDM5Q9NQX1 630 aaPredicted RBP12.2□□□□□ -0.46
LITAF-221ENST00000622633 TEKT2Q9UIF3 430 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 TLR6Q9Y2C9 796 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 ARL5AQ9Y689 179 aa12.2□□□□□ -0.46
LITAF-221ENST00000622633 SAC3D1A6NKF1 404 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 PIP5K1BO14986 540 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 B4GAT1O43505 415 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 PPM1BO75688 479 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 SNAP29O95721 258 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 PGRP06401 933 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 YBX1P67809 324 aaKnown RBP12.19□□□□□ -0.46
LITAF-221ENST00000622633 YWHAHQ04917 246 aaPredicted RBP12.19□□□□□ -0.46
LITAF-221ENST00000622633 CAPRIN1Q14444 709 aaKnown RBP12.19□□□□□ -0.46
LITAF-221ENST00000622633 SEMA3AQ14563 771 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 GRM7Q14831 915 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 Q3ZCU0 254 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 LETMD1Q6P1Q0 360 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 HACD2Q6Y1H2 254 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 CDH24Q86UP0 819 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 DDIASQ8IXT1 998 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 METTL4Q8N3J2 472 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 ANKFN1Q8N957 763 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 OR52H1Q8NGJ2 320 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 DUS3LQ96G46 650 aaKnown RBP12.19□□□□□ -0.46
LITAF-221ENST00000622633 KCTD14Q9BQ13 255 aaPredicted RBP12.19□□□□□ -0.46
LITAF-221ENST00000622633 ROGDIQ9GZN7 287 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 FBXL12Q9NXK8 326 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 EGFL7Q9UHF1 273 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 BAG5Q9UL15 447 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 AURKCQ9UQB9 309 aa12.19□□□□□ -0.46
LITAF-221ENST00000622633 HMX3A6NHT5 357 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms