RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 AGTRAPQ6RW13 159 aa13.84□□□□□ -0.19
CLTCL1-212ENST00000622493 TMEFF1Q8IYR6 380 aa13.84□□□□□ -0.19
CLTCL1-212ENST00000622493 TEX9Q8N6V9 391 aa13.84□□□□□ -0.19
CLTCL1-212ENST00000622493 PHC3Q8NDX5 983 aa13.84□□□□□ -0.19
CLTCL1-212ENST00000622493 GPBAR1Q8TDU6 330 aa13.84□□□□□ -0.19
CLTCL1-212ENST00000622493 C12orf66Q96MD2 445 aa13.84□□□□□ -0.19
CLTCL1-212ENST00000622493 SHCBP1LQ9BZQ2 653 aa13.84□□□□□ -0.19
CLTCL1-212ENST00000622493 TMEM168Q9H0V1 697 aa13.84□□□□□ -0.19
CLTCL1-212ENST00000622493 IPPKQ9H8X2 491 aa13.84□□□□□ -0.19
CLTCL1-212ENST00000622493 TM9SF3Q9HD45 589 aa13.84□□□□□ -0.19
CLTCL1-212ENST00000622493 DNAJC28Q9NX36 388 aa13.84□□□□□ -0.19
CLTCL1-212ENST00000622493 POLG2Q9UHN1 485 aa13.84□□□□□ -0.19
CLTCL1-212ENST00000622493 FBXO4Q9UKT5 387 aa13.84□□□□□ -0.19
CLTCL1-212ENST00000622493 APOBEC2Q9Y235 224 aaKnown RBP13.84□□□□□ -0.19
CLTCL1-212ENST00000622493 TRAF6Q9Y4K3 522 aa13.84□□□□□ -0.19
CLTCL1-212ENST00000622493 HEBP2Q9Y5Z4 205 aa13.84□□□□□ -0.19
CLTCL1-212ENST00000622493 LRP4O75096 1905 aa13.83□□□□□ -0.19
CLTCL1-212ENST00000622493 NCOR1O75376 2440 aa13.83□□□□□ -0.2
CLTCL1-212ENST00000622493 TRPC5OSA6NMA1 111 aa13.83□□□□□ -0.2
CLTCL1-212ENST00000622493 PDZK1P1A8MUH7 402 aa13.83□□□□□ -0.2
CLTCL1-212ENST00000622493 TLR4O00206 839 aa13.83□□□□□ -0.2
CLTCL1-212ENST00000622493 PPP6CO00743 305 aa13.83□□□□□ -0.2
CLTCL1-212ENST00000622493 ZNF195O14628 629 aa13.83□□□□□ -0.2
CLTCL1-212ENST00000622493 WNT1P04628 370 aa13.83□□□□□ -0.2
CLTCL1-212ENST00000622493 TSPAN8P19075 237 aa13.83□□□□□ -0.2
CLTCL1-212ENST00000622493 MAOBP27338 520 aa13.83□□□□□ -0.2
CLTCL1-212ENST00000622493 IMPA1P29218 277 aa13.83□□□□□ -0.2
CLTCL1-212ENST00000622493 HSD17B2P37059 387 aa13.83□□□□□ -0.2
CLTCL1-212ENST00000622493 ACTR1BP42025 376 aa13.83□□□□□ -0.2
CLTCL1-212ENST00000622493 GDF5P43026 501 aa13.83□□□□□ -0.2
CLTCL1-212ENST00000622493 ACTR1AP61163 376 aa13.83□□□□□ -0.2
CLTCL1-212ENST00000622493 CSTF1Q05048 431 aaKnown RBP13.83□□□□□ -0.2
CLTCL1-212ENST00000622493 SF3A3Q12874 501 aaKnown RBP eCLIP13.83□□□□□ -0.23e-8■■■■■ 54.4
CLTCL1-212ENST00000622493 ARHGAP19Q14CB8 494 aa13.83□□□□□ -0.2
CLTCL1-212ENST00000622493 ZXDCQ2QGD7 858 aaPredicted RBP13.83□□□□□ -0.2
CLTCL1-212ENST00000622493 BMP8AQ7Z5Y6 402 aa13.83□□□□□ -0.2
CLTCL1-212ENST00000622493 MAML2Q8IZL2 1156 aaPredicted RBP13.83□□□□□ -0.2
CLTCL1-212ENST00000622493 OR5AR1Q8NGP9 310 aa13.83□□□□□ -0.2
CLTCL1-212ENST00000622493 OR56A3Q8NH54 315 aa13.83□□□□□ -0.2
CLTCL1-212ENST00000622493 AGR3Q8TD06 166 aa13.83□□□□□ -0.2
CLTCL1-212ENST00000622493 ATP6V1E2Q96A05 226 aa13.83□□□□□ -0.2
CLTCL1-212ENST00000622493 INSM2Q96T92 566 aaPredicted RBP13.83□□□□□ -0.2
CLTCL1-212ENST00000622493 NTMT1Q9BV86 223 aa13.83□□□□□ -0.2
CLTCL1-212ENST00000622493 TMEM120AQ9BXJ8 343 aa13.83□□□□□ -0.2
CLTCL1-212ENST00000622493 GSDMCQ9BYG8 508 aa13.83□□□□□ -0.2
CLTCL1-212ENST00000622493 MIR1-1HGQ9H1L0 117 aa13.83□□□□□ -0.2
CLTCL1-212ENST00000622493 MVB12BQ9H7P6 319 aa13.83□□□□□ -0.2
CLTCL1-212ENST00000622493 NOL11Q9H8H0 719 aaKnown RBP13.83□□□□□ -0.2
CLTCL1-212ENST00000622493 ST14Q9Y5Y6 855 aa13.83□□□□□ -0.2
CLTCL1-212ENST00000622493 SLCO1B1Q9Y6L6 691 aa13.83□□□□□ -0.2
CLTCL1-212ENST00000622493 ZNF839A8K0R7 811 aa13.82□□□□□ -0.2
CLTCL1-212ENST00000622493 AZIN1O14977 448 aa13.82□□□□□ -0.2
CLTCL1-212ENST00000622493 KDM1AO60341 852 aa13.82□□□□□ -0.2
CLTCL1-212ENST00000622493 WDR47O94967 919 aa13.82□□□□□ -0.2
CLTCL1-212ENST00000622493 NDUFS1P28331 727 aa13.82□□□□□ -0.2
CLTCL1-212ENST00000622493 HNRNPH1P31943 449 aaKnown RBP13.82□□□□□ -0.2
CLTCL1-212ENST00000622493 CCNG1P51959 295 aa13.82□□□□□ -0.2
CLTCL1-212ENST00000622493 CLCA4Q14CN2 919 aa13.82□□□□□ -0.2
CLTCL1-212ENST00000622493 RBBP7Q16576 425 aa13.82□□□□□ -0.2
CLTCL1-212ENST00000622493 CCSMST1Q4G0I0 132 aa13.82□□□□□ -0.2
CLTCL1-212ENST00000622493 GPRIN3Q6ZVF9 776 aa13.82□□□□□ -0.2
CLTCL1-212ENST00000622493 EFL1Q7Z2Z2 1120 aaKnown RBP13.82□□□□□ -0.2
CLTCL1-212ENST00000622493 RAB42Q8N4Z0 105 aa13.82□□□□□ -0.2
CLTCL1-212ENST00000622493 TMEM105Q8N8V8 129 aa13.82□□□□□ -0.2
CLTCL1-212ENST00000622493 DTWD2Q8NBA8 298 aa13.82□□□□□ -0.2
CLTCL1-212ENST00000622493 GAB3Q8WWW8 586 aa13.82□□□□□ -0.2
CLTCL1-212ENST00000622493 ATG10Q9H0Y0 220 aa13.82□□□□□ -0.2
CLTCL1-212ENST00000622493 PRDM8Q9NQV8 689 aa13.82□□□□□ -0.2
CLTCL1-212ENST00000622493 DNAJC11Q9NVH1 559 aa13.82□□□□□ -0.2
CLTCL1-212ENST00000622493 SPATA7Q9P0W8 599 aa13.82□□□□□ -0.2
CLTCL1-212ENST00000622493 TBC1D29Q9UFV1 150 aa13.82□□□□□ -0.2
CLTCL1-212ENST00000622493 LNPEPQ9UIQ6 1025 aa13.82□□□□□ -0.2
CLTCL1-212ENST00000622493 COLEC10Q9Y6Z7 277 aa13.82□□□□□ -0.2
CLTCL1-212ENST00000622493 ABCA7Q8IZY2 2146 aa13.82□□□□□ -0.2
CLTCL1-212ENST00000622493 OR7A17O14581 309 aa13.81□□□□□ -0.2
CLTCL1-212ENST00000622493 VILLO15195 856 aa13.81□□□□□ -0.2
CLTCL1-212ENST00000622493 DCTN3O75935 186 aa13.81□□□□□ -0.2
CLTCL1-212ENST00000622493 CSF2P04141 144 aa13.81□□□□□ -0.2
CLTCL1-212ENST00000622493 EBLN1P0CF75 366 aa13.81□□□□□ -0.2
CLTCL1-212ENST00000622493 ERGP11308 486 aa13.81□□□□□ -0.2
CLTCL1-212ENST00000622493 CTSEP14091 401 aa13.81□□□□□ -0.2
CLTCL1-212ENST00000622493 CCND1P24385 295 aa13.81□□□□□ -0.2
CLTCL1-212ENST00000622493 AK4P27144 223 aaPredicted RBP13.81□□□□□ -0.2
CLTCL1-212ENST00000622493 AFF3P51826 1226 aaKnown RBP13.81□□□□□ -0.2
CLTCL1-212ENST00000622493 CDC16Q13042 620 aa13.81□□□□□ -0.2
CLTCL1-212ENST00000622493 GRB7Q14451 532 aa13.81□□□□□ -0.2
CLTCL1-212ENST00000622493 KANK2Q63ZY3 851 aa13.81□□□□□ -0.2
CLTCL1-212ENST00000622493 CAPN13Q6MZZ7 669 aaPredicted RBP13.81□□□□□ -0.2
CLTCL1-212ENST00000622493 EPGNQ6UW88 154 aa13.81□□□□□ -0.2
CLTCL1-212ENST00000622493 NRROSQ86YC3 692 aa13.81□□□□□ -0.2
CLTCL1-212ENST00000622493 PHACTR4Q8IZ21 702 aa13.81□□□□□ -0.2
CLTCL1-212ENST00000622493 OR52B6Q8NGF0 335 aa13.81□□□□□ -0.2
CLTCL1-212ENST00000622493 ZNF480Q8WV37 535 aa13.81□□□□□ -0.2
CLTCL1-212ENST00000622493 MAGEB10Q96LZ2 347 aaPredicted RBP13.81□□□□□ -0.2
CLTCL1-212ENST00000622493 FERD3LQ96RJ6 166 aa13.81□□□□□ -0.2
CLTCL1-212ENST00000622493 NUSAP1Q9BXS6 441 aaKnown RBP13.81□□□□□ -0.2
CLTCL1-212ENST00000622493 PFDN4Q9NQP4 134 aa13.81□□□□□ -0.2
CLTCL1-212ENST00000622493 IMP3Q9NV31 184 aaKnown RBP13.81□□□□□ -0.2
CLTCL1-212ENST00000622493 INTS7Q9NVH2 962 aaKnown RBP13.81□□□□□ -0.2
CLTCL1-212ENST00000622493 ZNF225Q9UK10 706 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms