RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 GPR149Q86SP6 731 aa9.21□□□□□ -0.94
PDPN-212ENST00000621990 FAM9CQ8IZT9 166 aa9.21□□□□□ -0.94
PDPN-212ENST00000621990 CMTM8Q8IZV2 173 aa9.21□□□□□ -0.94
PDPN-212ENST00000621990 KRTCAP2Q8N6L1 136 aa9.21□□□□□ -0.94
PDPN-212ENST00000621990 PNPT1Q8TCS8 783 aaKnown RBP9.21□□□□□ -0.94
PDPN-212ENST00000621990 TESCQ96BS2 214 aa9.21□□□□□ -0.94
PDPN-212ENST00000621990 ASIC4Q96FT7 647 aa9.21□□□□□ -0.94
PDPN-212ENST00000621990 ZFP14Q9HCL3 533 aa9.21□□□□□ -0.94
PDPN-212ENST00000621990 A0A096LPI6 279 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 FAM220BPB1ANY3 271 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 WASH3PC4AMC7 463 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 CLIC3O95833 236 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 SOX11P35716 441 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 CHRNB3Q05901 458 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 NKG7Q16617 165 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 CARD16Q5EG05 197 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 CCNYL2Q5T2Q4 361 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 DHRS4L2Q6PKH6 230 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 RFLNAQ6ZTI6 216 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 NEK10Q6ZWH5 1172 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 UBE2R2Q712K3 238 aaPredicted RBP9.2□□□□□ -0.94
PDPN-212ENST00000621990 FAM86B1Q8N7N1 296 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 PJA1Q8NG27 643 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 OR10A6Q8NH74 314 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 TMBIM1Q969X1 311 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 FCRL1Q96LA6 429 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 OR52E6Q96RD3 313 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 DOK1Q99704 481 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 FAM83CQ9BQN1 747 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 CPPED1Q9BRF8 314 aaPredicted RBP9.2□□□□□ -0.94
PDPN-212ENST00000621990 NPLQ9BXD5 320 aaPredicted RBP9.2□□□□□ -0.94
PDPN-212ENST00000621990 SLC46A2Q9BY10 475 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 KCNH6Q9H252 994 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 MAGIXQ9H6Y5 334 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 ACTR8Q9H981 624 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 DNAJB9Q9UBS3 223 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 MBD1Q9UIS9 605 aaPredicted RBP9.2□□□□□ -0.94
PDPN-212ENST00000621990 SNX6Q9UNH7 406 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 TMED5Q9Y3A6 229 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 PTPRSQ13332 1948 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 MKI67P46013 3256 aaKnown RBP9.2□□□□□ -0.94
PDPN-212ENST00000621990 ELOVL7A1L3X0 281 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 ANKRD33BA6NCL7 494 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 TRIM64BA6NI03 449 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 GRM6O15303 877 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 GMNNO75496 209 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 CTSAP10619 480 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 PRPS2P11908 318 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 TCF3P15923 654 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 MTHFRP42898 656 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 HLCSP50747 726 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 DCDC1P59894 354 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 RPS14P62263 151 aaKnown RBP9.2□□□□□ -0.94
PDPN-212ENST00000621990 ESRRGP62508 458 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 PHC1P78364 1004 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 PLEKHS1Q5SXH7 462 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 ASTLQ6HA08 431 aaPredicted RBP9.2□□□□□ -0.94
PDPN-212ENST00000621990 TMEM214Q6NUQ4 689 aaKnown RBP9.2□□□□□ -0.94
PDPN-212ENST00000621990 ENPP6Q6UWR7 440 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 DPY19L3Q6ZPD9 716 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 MSANTD1Q6ZTZ1 278 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 GPR141Q7Z602 305 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 OFCC1Q8IZS5 231 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 PAF1Q8N7H5 531 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 CMTM7Q96FZ5 175 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 CNDP2Q96KP4 475 aaKnown RBP9.2□□□□□ -0.94
PDPN-212ENST00000621990 MAGEB10Q96LZ2 347 aaPredicted RBP9.2□□□□□ -0.94
PDPN-212ENST00000621990 THUMPD3Q9BV44 507 aaKnown RBP9.2□□□□□ -0.94
PDPN-212ENST00000621990 BRD9Q9H8M2 597 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 DCAF13Q9NV06 445 aaKnown RBP9.2□□□□□ -0.94
PDPN-212ENST00000621990 USE1Q9NZ43 259 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.2□□□□□ -0.94
PDPN-212ENST00000621990 DLGAP4Q9Y2H0 992 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 V9GYQ6 96 aa9.2□□□□□ -0.94
PDPN-212ENST00000621990 A0A1B0GVG6 124 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 A0A1W2PRU2 124 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 LRG1P02750 347 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 CDK4P11802 303 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 ATP1B2P14415 290 aaPredicted RBP9.19□□□□□ -0.94
PDPN-212ENST00000621990 NFKBIAP25963 317 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 TTKP33981 857 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 AP1S2P56377 157 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 PPP2R2BQ00005 443 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 SEMG2Q02383 582 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 ZNF33BQ06732 778 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 CCDC149Q6ZUS6 474 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 MICU2Q8IYU8 434 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 SVOPLQ8N434 492 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 BEND7Q8N7W2 519 aaPredicted RBP9.19□□□□□ -0.94
PDPN-212ENST00000621990 ZNF420Q8TAQ5 688 aaPredicted RBP9.19□□□□□ -0.94
PDPN-212ENST00000621990 FIG4Q92562 907 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 AURKBQ96GD4 344 aaPredicted RBP9.19□□□□□ -0.94
PDPN-212ENST00000621990 EMILIN2Q9BXX0 1053 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 GPBP1L1Q9HC44 474 aaPredicted RBP9.19□□□□□ -0.94
PDPN-212ENST00000621990 SLC6A13Q9NSD5 602 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 DDX18Q9NVP1 670 aaKnown RBP9.19□□□□□ -0.94
PDPN-212ENST00000621990 NFKBIL1Q9UBC1 381 aaPredicted RBP9.19□□□□□ -0.94
PDPN-212ENST00000621990 B4GALT6Q9UBX8 382 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 ADGRE2Q9UHX3 823 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 SLC25A13Q9UJS0 675 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms