RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 GBAP04062 536 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 JMJD7P0C870 316 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 JUNDP17535 347 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 KLF1Q13351 362 aaPredicted RBP9.04□□□□□ -0.96
GGA3-223ENST00000621870 LARS2Q15031 903 aaKnown RBP9.04□□□□□ -0.96
GGA3-223ENST00000621870 FBXO43Q4G163 708 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 FRG2Q64ET8 278 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 RTL4Q6ZR62 310 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 FAM43BQ6ZT52 329 aaPredicted RBP9.04□□□□□ -0.96
GGA3-223ENST00000621870 RPS27LQ71UM5 84 aaKnown RBP9.04□□□□□ -0.96
GGA3-223ENST00000621870 YTHDF3Q7Z739 585 aaKnown RBP9.04□□□□□ -0.96
GGA3-223ENST00000621870 GKN2Q86XP6 184 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 COX18Q8N8Q8 333 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 BPIFB6Q8NFQ5 453 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 FIBINQ8TAL6 211 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 HM13Q8TCT9 377 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 RLN3Q8WXF3 142 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 RORBQ92753 470 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 SLCO2A1Q92959 643 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 ZBED6CLQ96FA7 236 aaPredicted RBP9.04□□□□□ -0.96
GGA3-223ENST00000621870 FRG2BQ96QU4 278 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 OR2M4Q96R27 311 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 CDCA3Q99618 268 aaPredicted RBP9.04□□□□□ -0.96
GGA3-223ENST00000621870 SH3GL2Q99962 352 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 TPRKBQ9Y3C4 175 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 ACTL7AQ9Y615 435 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 MYH6P13533 1939 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 UBR2Q8IWV8 1755 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 MYH9P35579 1960 aaKnown RBP9.04□□□□□ -0.96
GGA3-223ENST00000621870 A8MUI8 341 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 KERAO60938 352 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 PSMG1O95456 288 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 CHRM1P11229 460 aaPredicted RBP9.04□□□□□ -0.96
GGA3-223ENST00000621870 HSD17B2P37059 387 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 YAP1P46937 504 aaKnown RBP9.04□□□□□ -0.96
GGA3-223ENST00000621870 TAS2R50P59544 299 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 BNIP2Q12982 314 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 TTC23Q5W5X9 447 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 ZNF783Q6ZMS7 281 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 NUDT13Q86X67 352 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 DCUN1D3Q8IWE4 304 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 ULK2Q8IYT8 1036 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 C1orf52Q8N6N3 182 aaKnown RBP9.04□□□□□ -0.96
GGA3-223ENST00000621870 SLC13A3Q8WWT9 602 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 YIPF4Q9BSR8 244 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 C8orf33Q9H7E9 229 aaPredicted RBP9.04□□□□□ -0.96
GGA3-223ENST00000621870 IL21RQ9HBE5 538 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 KLF15Q9UIH9 416 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 SNX7Q9UNH6 387 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 PCDHB11Q9Y5F2 797 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 GMPPBQ9Y5P6 360 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 FAM159BA6NKW6 160 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 FAM170BA6NMN3 283 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 H7BY64 318 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 MAN1A2O60476 641 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 DLX3O60479 287 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 IL7RP16871 459 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 AGXTP21549 392 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 SOX9P48436 509 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 UGT2B15P54855 530 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 CDC42P60953 191 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 SHHQ15465 462 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 HKDC1Q2TB90 917 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 PM20D1Q6GTS8 502 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 CDC73Q6P1J9 531 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 TMEM173Q86WV6 379 aaPredicted RBP9.04□□□□□ -0.96
GGA3-223ENST00000621870 HPS6Q86YV9 775 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 CAMKVQ8NCB2 501 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 RBM15BQ8NDT2 890 aaKnown RBP9.04□□□□□ -0.96
GGA3-223ENST00000621870 OR10A6Q8NH74 314 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 MYLIPQ8WY64 445 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 CENPIQ92674 756 aaPredicted RBP9.04□□□□□ -0.96
GGA3-223ENST00000621870 MTERF3Q96E29 417 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 PRAP1Q96NZ9 151 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 TUBGCP5Q96RT8 1024 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 FAM83CQ9BQN1 747 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 DGCR6LQ9BY27 220 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 PNO1Q9NRX1 252 aaKnown RBP9.04□□□□□ -0.96
GGA3-223ENST00000621870 CXXC1Q9P0U4 656 aaPredicted RBP9.04□□□□□ -0.96
GGA3-223ENST00000621870 HCN3Q9P1Z3 774 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 SUSD2Q9UGT4 822 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 APOBEC3BQ9UH17 382 aaKnown RBP9.04□□□□□ -0.96
GGA3-223ENST00000621870 C4AP0C0L4 1744 aa9.04□□□□□ -0.96
GGA3-223ENST00000621870 LOC730098B7Z3J9 87 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 WASH3PC4AMC7 463 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 TMEM189-UBE2V1I3L0A0 370 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 LATO43561 262 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 SDC3O75056 442 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 ASGR2P07307 311 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 WDR4P57081 412 aaKnown RBP9.03□□□□□ -0.96
GGA3-223ENST00000621870 GPX6P59796 221 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 HERVK_113P63132 956 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 BNC1Q01954 994 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 MEF2AQ02078 507 aaPredicted RBP9.03□□□□□ -0.96
GGA3-223ENST00000621870 EPS8Q12929 822 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 PCBP2Q15366 365 aaKnown RBP eCLIP9.03□□□□□ -0.966e-7■■■■□ 21.4
GGA3-223ENST00000621870 OR52J3Q8NH60 311 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 CLPTM1LQ96KA5 538 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 MRGPRX2Q96LB1 330 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 GPR22Q99680 433 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms