RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 FBXO15Q8NCQ5 510 aaPredicted RBP20.89■□□□□ 0.93
SPAST-204ENST00000621856 RCN3Q96D15 328 aa20.89■□□□□ 0.93
SPAST-204ENST00000621856 MED8Q96G25 268 aa20.89■□□□□ 0.93
SPAST-204ENST00000621856 HBEGFQ99075 208 aa20.89■□□□□ 0.93
SPAST-204ENST00000621856 MMADHCQ9H3L0 296 aaPredicted RBP20.89■□□□□ 0.93
SPAST-204ENST00000621856 CCDC167Q9P0B6 97 aa20.89■□□□□ 0.93
SPAST-204ENST00000621856 GABRG2P18507 467 aa20.88■□□□□ 0.93
SPAST-204ENST00000621856 ITGAXP20702 1163 aa20.88■□□□□ 0.93
SPAST-204ENST00000621856 TPMTP51580 245 aa20.88■□□□□ 0.93
SPAST-204ENST00000621856 ABRAXAS2Q15018 415 aa20.88■□□□□ 0.93
SPAST-204ENST00000621856 NR6A1Q15406 480 aa20.88■□□□□ 0.93
SPAST-204ENST00000621856 GSTA3Q16772 222 aa20.88■□□□□ 0.93
SPAST-204ENST00000621856 MIER2Q8N344 545 aa20.88■□□□□ 0.93
SPAST-204ENST00000621856 HMGCLL1Q8TB92 370 aa20.88■□□□□ 0.93
SPAST-204ENST00000621856 HMGB4Q8WW32 186 aa20.88■□□□□ 0.93
SPAST-204ENST00000621856 APOOQ9BUR5 198 aa20.88■□□□□ 0.93
SPAST-204ENST00000621856 TM7SF3Q9NS93 570 aa20.88■□□□□ 0.93
SPAST-204ENST00000621856 MANBAO00462 879 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 SLC16A8O95907 504 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 C7P10643 843 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 IDO1P14902 403 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 ACADLP28330 430 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 IMPA1P29218 277 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 HALP42357 657 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 NME5P56597 212 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 IRX1P78414 480 aaPredicted RBP20.87■□□□□ 0.93
SPAST-204ENST00000621856 SGO1Q5FBB7 561 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 PAOXQ6QHF9 649 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 UNC5DQ6UXZ4 953 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 ZNF852Q6ZMS4 543 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 Q6ZS52 159 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 PDZD3Q86UT5 571 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 THOC6Q86W42 341 aaKnown RBP20.87■□□□□ 0.93
SPAST-204ENST00000621856 PGBD3Q8N328 593 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 ASB12Q8WXK4 309 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 ZMYND15Q9H091 742 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 OR52A5Q9H2C5 316 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 MOSPD1Q9UJG1 213 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 ZNF490Q9ULM2 529 aaPredicted RBP20.87■□□□□ 0.93
SPAST-204ENST00000621856 CA14Q9ULX7 337 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 CACNB4O00305 520 aaPredicted RBP20.87■□□□□ 0.93
SPAST-204ENST00000621856 SLC28A1O00337 649 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 ULK1O75385 1050 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 KRT6AP02538 564 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 KRT6BP04259 564 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 GPX3P22352 226 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 ACSL1P33121 698 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 KRT6CP48668 564 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 ERVK-8P63133 956 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 MLLT1Q03111 559 aaPredicted RBP20.87■□□□□ 0.93
SPAST-204ENST00000621856 CPSF6Q16630 551 aaKnown RBP eCLIP20.87■□□□□ 0.93
SPAST-204ENST00000621856 Q6ZSR9 355 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 SCUBE1Q8IWY4 988 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 KLHDC8AQ8IYD2 350 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 SFRP1Q8N474 314 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 FNDC5Q8NAU1 212 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 KYQ8NBH2 561 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 ZDHHC5Q9C0B5 715 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 BTBD1Q9H0C5 482 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 EFCAB1Q9HAE3 211 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 POLMQ9NP87 494 aaPredicted RBP20.87■□□□□ 0.93
SPAST-204ENST00000621856 BAIAP2L1Q9UHR4 511 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 ASF1AQ9Y294 204 aa20.87■□□□□ 0.93
SPAST-204ENST00000621856 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.87■□□□□ 0.93
SPAST-204ENST00000621856 KLHL33A6NCF5 533 aa20.86■□□□□ 0.93
SPAST-204ENST00000621856 LRRC72A6NJI9 287 aa20.86■□□□□ 0.93
SPAST-204ENST00000621856 RGS14O43566 566 aa20.86■□□□□ 0.93
SPAST-204ENST00000621856 SNRPB2P08579 225 aaKnown RBP20.86■□□□□ 0.93
SPAST-204ENST00000621856 STX5Q13190 355 aa20.86■□□□□ 0.93
SPAST-204ENST00000621856 ART3Q13508 389 aa20.86■□□□□ 0.93
SPAST-204ENST00000621856 IMPG1Q17R60 797 aa20.86■□□□□ 0.93
SPAST-204ENST00000621856 GGTA1PQ4G0N0 100 aa20.86■□□□□ 0.93
SPAST-204ENST00000621856 TMEM31Q5JXX7 168 aa20.86■□□□□ 0.93
SPAST-204ENST00000621856 C6orf136Q5SQH8 315 aa20.86■□□□□ 0.93
SPAST-204ENST00000621856 C16orf89Q6UX73 402 aa20.86■□□□□ 0.93
SPAST-204ENST00000621856 CHST15Q7LFX5 561 aaPredicted RBP20.86■□□□□ 0.93
SPAST-204ENST00000621856 DEFB107AQ8IZN7 70 aa20.86■□□□□ 0.93
SPAST-204ENST00000621856 PPFIBP2Q8ND30 876 aa20.86■□□□□ 0.93
SPAST-204ENST00000621856 SPDYE1Q8NFV5 336 aaPredicted RBP20.86■□□□□ 0.93
SPAST-204ENST00000621856 OR9I1Q8NGQ6 314 aa20.86■□□□□ 0.93
SPAST-204ENST00000621856 OR9A1PQ8NGU1 263 aa20.86■□□□□ 0.93
SPAST-204ENST00000621856 OR2T34Q8NGX1 318 aa20.86■□□□□ 0.93
SPAST-204ENST00000621856 MAGEC3Q8TD91 643 aa20.86■□□□□ 0.93
SPAST-204ENST00000621856 MAGEB10Q96LZ2 347 aaPredicted RBP20.86■□□□□ 0.93
SPAST-204ENST00000621856 C1orf50Q9BV19 199 aa20.86■□□□□ 0.93
SPAST-204ENST00000621856 FARSBQ9NSD9 589 aaKnown RBP20.86■□□□□ 0.93
SPAST-204ENST00000621856 INTS7Q9NVH2 962 aaKnown RBP20.86■□□□□ 0.93
SPAST-204ENST00000621856 AIG1Q9NVV5 245 aa20.86■□□□□ 0.93
SPAST-204ENST00000621856 SNX6Q9UNH7 406 aa20.86■□□□□ 0.93
SPAST-204ENST00000621856 DUSP12Q9UNI6 340 aa20.86■□□□□ 0.93
SPAST-204ENST00000621856 PSMD13Q9UNM6 376 aa20.86■□□□□ 0.93
SPAST-204ENST00000621856 CIB2O75838 187 aa20.85■□□□□ 0.93
SPAST-204ENST00000621856 ATP6V1G2O95670 118 aa20.85■□□□□ 0.93
SPAST-204ENST00000621856 ACP5P13686 325 aa20.85■□□□□ 0.93
SPAST-204ENST00000621856 IL9P15248 144 aa20.85■□□□□ 0.93
SPAST-204ENST00000621856 ACADVLP49748 655 aa20.85■□□□□ 0.93
SPAST-204ENST00000621856 DIO3P55073 304 aa20.85■□□□□ 0.93
SPAST-204ENST00000621856 IRF8Q02556 426 aa20.85■□□□□ 0.93
SPAST-204ENST00000621856 CHIT1Q13231 466 aa20.85■□□□□ 0.93
SPAST-204ENST00000621856 MMEL1Q495T6 779 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms