RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 MIA3Q5JRA6 1907 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 SERPINA1P01009 418 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 CHRNA1P02708 482 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 MT-ND2P03891 347 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 SPNP16150 400 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 RPL34P49207 117 aaKnown RBP6.82□□□□□ -1.32
NEDD9-216ENST00000620854 ST13P50502 369 aaKnown RBP6.82□□□□□ -1.32
NEDD9-216ENST00000620854 DGKEP52429 567 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 ISL1P61371 349 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 EMX2Q04743 252 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 STARD3Q14849 445 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 MAPKAPK3Q16644 382 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 INTS6LQ5JSJ4 861 aaKnown RBP6.82□□□□□ -1.32
NEDD9-216ENST00000620854 RBM48Q5RL73 367 aaKnown RBP6.82□□□□□ -1.32
NEDD9-216ENST00000620854 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.82□□□□□ -1.32
NEDD9-216ENST00000620854 ARMC4Q5T2S8 1044 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 RAP1GAP2Q684P5 730 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 CYP20A1Q6UW02 462 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 Q6ZPB1 254 aaPredicted RBP6.82□□□□□ -1.32
NEDD9-216ENST00000620854 VASH1Q7L8A9 365 aaPredicted RBP6.82□□□□□ -1.32
NEDD9-216ENST00000620854 GPSM1Q86YR5 675 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 ARMC8Q8IUR7 673 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 CFAP52Q8N1V2 620 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 OR4K2Q8NGD2 314 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 OR56A4Q8NGH8 313 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 OR4L1Q8NH43 312 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 BTN2A2Q8WVV5 523 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 FAR1Q8WVX9 515 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 KCTD13Q8WZ19 329 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 SCLYQ96I15 445 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 ZNF583Q96ND8 569 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 ATOH8Q96SQ7 321 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 CDK5RAP1Q96SZ6 601 aaKnown RBP6.82□□□□□ -1.32
NEDD9-216ENST00000620854 TSEN34Q9BSV6 310 aaKnown RBP6.82□□□□□ -1.32
NEDD9-216ENST00000620854 TM6SF2Q9BZW4 377 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 RMND5AQ9H871 391 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 AKIP1Q9NQ31 210 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 SLC52A3Q9NQ40 469 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 FARSBQ9NSD9 589 aaKnown RBP6.82□□□□□ -1.32
NEDD9-216ENST00000620854 CDV3Q9UKY7 258 aaKnown RBP6.82□□□□□ -1.32
NEDD9-216ENST00000620854 PCDHB14Q9Y5E9 798 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 MYO10Q9HD67 2058 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 PHIPQ8WWQ0 1821 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 A0A096LPI6 279 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 A0A1W2PQ67 120 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 TAF4O00268 1085 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 PTGESO14684 152 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 TFECO14948 347 aaPredicted RBP6.81□□□□□ -1.32
NEDD9-216ENST00000620854 CCNKO75909 580 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 MATN4O95460 622 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 EOMESO95936 686 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 KRT6AP02538 564 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 KRT6BP04259 564 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 FGF4P08620 206 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 ENO2P09104 434 aaPredicted RBP6.81□□□□□ -1.32
NEDD9-216ENST00000620854 HTR1EP28566 365 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 C21orf33P30042 268 aaPredicted RBP6.81□□□□□ -1.32
NEDD9-216ENST00000620854 KRT6CP48668 564 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 POLD2P49005 469 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 ATP4BP51164 291 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 EEFSECP57772 596 aaKnown RBP6.81□□□□□ -1.32
NEDD9-216ENST00000620854 ST8SIA6P61647 398 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 SPANXN4Q5MJ08 99 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 LETMD1Q6P1Q0 360 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 GPRIN3Q6ZVF9 776 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 C16orf59Q7L2K0 433 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 OTOP2Q7RTS6 562 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 UBE2J2Q8N2K1 259 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 LEMD2Q8NC56 503 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 ITPKCQ96DU7 683 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 MED8Q96G25 268 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 SH3GL1Q99961 368 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 UGT2B28Q9BY64 529 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 RNF38Q9H0F5 515 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 CATSPERZQ9NTU4 200 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 MIOSQ9NXC5 875 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 MAGEL2Q9UJ55 1249 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 ERVK-11Q9UQG0 969 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 HS3ST4Q9Y661 456 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 OR6C75A6NL08 312 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 EFCAB9A8MZ26 197 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 LDB2O43679 373 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 EEDO75530 441 aaKnown RBP6.81□□□□□ -1.32
NEDD9-216ENST00000620854 CTNNB1P35222 781 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 DCTP40126 519 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 MASP1P48740 699 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 ALDH9A1P49189 494 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 NUDT6P53370 316 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 ERVPABLB-1P60509 514 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 ERVK-8P63133 956 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 TIAL1Q01085 375 aaKnown RBP eCLIP6.81□□□□□ -1.322e-6■■□□□ 12.6
NEDD9-216ENST00000620854 HSPA14Q0VDF9 509 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 GALNT1Q10472 559 aaPredicted RBP6.81□□□□□ -1.32
NEDD9-216ENST00000620854 ILF2Q12905 390 aaKnown RBP6.81□□□□□ -1.32
NEDD9-216ENST00000620854 CLCA4Q14CN2 919 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 STEAP3Q658P3 488 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 DESI1Q6ICB0 168 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 ALKAL1Q6UXT8 129 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 DLEU7Q6UYE1 221 aa6.81□□□□□ -1.32
NEDD9-216ENST00000620854 PLEKHM3Q6ZWE6 761 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms