RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 TLK1Q9UKI8 766 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 HEBP2Q9Y5Z4 205 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 COLEC10Q9Y6Z7 277 aa13.24□□□□□ -0.29
NEK3-210ENST00000620675 OR6C74A6NCV1 312 aa13.23□□□□□ -0.29
NEK3-210ENST00000620675 AGRPO00253 132 aa13.23□□□□□ -0.29
NEK3-210ENST00000620675 KCNK5O95279 499 aa13.23□□□□□ -0.29
NEK3-210ENST00000620675 GUCA1CO95843 209 aa13.23□□□□□ -0.29
NEK3-210ENST00000620675 MT-ND3P03897 115 aa13.23□□□□□ -0.29
NEK3-210ENST00000620675 RPLP0P05388 317 aaKnown RBP13.23□□□□□ -0.29
NEK3-210ENST00000620675 LTA4HP09960 611 aaKnown RBP13.23□□□□□ -0.29
NEK3-210ENST00000620675 HOXB3P14651 431 aaPredicted RBP13.23□□□□□ -0.29
NEK3-210ENST00000620675 PEBP1P30086 187 aaKnown RBP13.23□□□□□ -0.29
NEK3-210ENST00000620675 GFERP55789 205 aa13.23□□□□□ -0.29
NEK3-210ENST00000620675 TAF1BQ53T94 588 aaPredicted RBP13.23□□□□□ -0.29
NEK3-210ENST00000620675 LGSNQ5TDP6 509 aa13.23□□□□□ -0.29
NEK3-210ENST00000620675 DHRS13Q6UX07 377 aa13.23□□□□□ -0.29
NEK3-210ENST00000620675 TRABD2AQ86V40 505 aa13.23□□□□□ -0.29
NEK3-210ENST00000620675 MARCH9Q86YJ5 346 aa13.23□□□□□ -0.29
NEK3-210ENST00000620675 FAM20CQ8IXL6 584 aa13.23□□□□□ -0.29
NEK3-210ENST00000620675 EXT2Q93063 718 aa13.23□□□□□ -0.29
NEK3-210ENST00000620675 SLC12A9Q9BXP2 914 aa13.23□□□□□ -0.29
NEK3-210ENST00000620675 ARGLU1Q9NWB6 273 aaPredicted RBP13.23□□□□□ -0.29
NEK3-210ENST00000620675 SEC16AO15027 2179 aa13.23□□□□□ -0.29
NEK3-210ENST00000620675 A0A087X1B8 175 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 NCF1BA6NI72 391 aaPredicted RBP13.22□□□□□ -0.29
NEK3-210ENST00000620675 LILRA5A6NI73 299 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 NCF1CA8MVU1 366 aaPredicted RBP13.22□□□□□ -0.29
NEK3-210ENST00000620675 UBXN7O94888 489 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 KLHL2O95198 593 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 SLC16A8O95907 504 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 CATP04040 527 aaKnown RBP13.22□□□□□ -0.29
NEK3-210ENST00000620675 FTH1P19P0C7X4 201 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 NCF1P14598 390 aaPredicted RBP13.22□□□□□ -0.29
NEK3-210ENST00000620675 KRT4P19013 534 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 DUSP3P51452 185 aaPredicted RBP13.22□□□□□ -0.29
NEK3-210ENST00000620675 LRIG3Q6UXM1 1119 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 GLRX5Q86SX6 157 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 SRRM1Q8IYB3 904 aaKnown RBP13.22□□□□□ -0.29
NEK3-210ENST00000620675 ADGRF3Q8IZF5 1079 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 OR9A1PQ8NGU1 263 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 OR10G6Q8NH81 332 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 NAT6Q93015 286 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 SLC32A1Q9H598 525 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 STN1Q9H668 368 aaKnown RBP13.22□□□□□ -0.29
NEK3-210ENST00000620675 PPCSQ9HAB8 311 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 PARVBQ9HBI1 364 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 DLL3Q9NYJ7 618 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 NCKIPSDQ9NZQ3 722 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 MYO1CO00159 1063 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 MPOP05164 745 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 C8GP07360 202 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 SBK3P0C264 359 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 POLR2CP19387 275 aaPredicted RBP13.22□□□□□ -0.29
NEK3-210ENST00000620675 PSMB5P28074 263 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 NDUFS1P28331 727 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 IMPA1P29218 277 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 PKLRP30613 574 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 ILF2Q12905 390 aaKnown RBP13.22□□□□□ -0.29
NEK3-210ENST00000620675 SUSD1Q6UWL2 747 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 ZNF574Q6ZN55 896 aaPredicted RBP13.22□□□□□ -0.29
NEK3-210ENST00000620675 TMEM151AQ8N4L1 468 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 ZNF480Q8WV37 535 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 NCSTNQ92542 709 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 KIAA1191Q96A73 305 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 RAD51AP1Q96B01 352 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 ATOH8Q96SQ7 321 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 TFB2MQ9H5Q4 396 aaKnown RBP13.22□□□□□ -0.29
NEK3-210ENST00000620675 UCK1Q9HA47 277 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 TMEM216Q9P0N5 145 aa13.22□□□□□ -0.29
NEK3-210ENST00000620675 UBXN8O00124 270 aa13.21□□□□□ -0.29
NEK3-210ENST00000620675 TK2O00142 265 aa13.21□□□□□ -0.29
NEK3-210ENST00000620675 KIF1CO43896 1103 aaKnown RBP13.21□□□□□ -0.29
NEK3-210ENST00000620675 OPA1O60313 960 aa13.21□□□□□ -0.29
NEK3-210ENST00000620675 RFPL3O75679 317 aa13.21□□□□□ -0.29
NEK3-210ENST00000620675 PROS1P07225 676 aa13.21□□□□□ -0.29
NEK3-210ENST00000620675 CEACAM1P13688 526 aa13.21□□□□□ -0.29
NEK3-210ENST00000620675 PNLIPP16233 465 aa13.21□□□□□ -0.29
NEK3-210ENST00000620675 CCNFP41002 786 aa13.21□□□□□ -0.29
NEK3-210ENST00000620675 GPR3P46089 330 aa13.21□□□□□ -0.29
NEK3-210ENST00000620675 PPM1FP49593 454 aaPredicted RBP13.21□□□□□ -0.29
NEK3-210ENST00000620675 TECRLQ5HYJ1 363 aa13.21□□□□□ -0.29
NEK3-210ENST00000620675 LRRC8EQ6NSJ5 796 aa13.21□□□□□ -0.29
NEK3-210ENST00000620675 B3GNT8Q7Z7M8 397 aa13.21□□□□□ -0.29
NEK3-210ENST00000620675 AMIGO1Q86WK6 493 aa13.21□□□□□ -0.29
NEK3-210ENST00000620675 RIBC1Q8N443 379 aaPredicted RBP13.21□□□□□ -0.29
NEK3-210ENST00000620675 ANKRD7Q92527 254 aa13.21□□□□□ -0.29
NEK3-210ENST00000620675 ESAMQ96AP7 390 aa13.21□□□□□ -0.29
NEK3-210ENST00000620675 ATG10Q9H0Y0 220 aa13.21□□□□□ -0.29
NEK3-210ENST00000620675 LRRN3Q9H3W5 708 aa13.21□□□□□ -0.29
NEK3-210ENST00000620675 SRMSQ9H3Y6 488 aa13.21□□□□□ -0.29
NEK3-210ENST00000620675 ABCF3Q9NUQ8 709 aa13.21□□□□□ -0.29
NEK3-210ENST00000620675 CPSF2Q9P2I0 782 aaKnown RBP13.21□□□□□ -0.29
NEK3-210ENST00000620675 KLHL3Q9UH77 587 aa13.21□□□□□ -0.29
NEK3-210ENST00000620675 POLG2Q9UHN1 485 aa13.21□□□□□ -0.29
NEK3-210ENST00000620675 EMCNQ9ULC0 261 aa13.21□□□□□ -0.29
NEK3-210ENST00000620675 ASB1Q9Y576 335 aa13.21□□□□□ -0.29
NEK3-210ENST00000620675 ZFHX4Q86UP3 3567 aa13.21□□□□□ -0.3
NEK3-210ENST00000620675 A0A1W2PPV9 198 aa13.2□□□□□ -0.3
NEK3-210ENST00000620675 NTN3O00634 580 aaPredicted RBP13.2□□□□□ -0.3
NEK3-210ENST00000620675 SPAG7O75391 227 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms