RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 TLR1Q15399 786 aa18.56■□□□□ 0.56
PSPC1-206ENST00000619300 ZFAND4Q86XD8 727 aa18.56■□□□□ 0.56
PSPC1-206ENST00000619300 TRAPPC5Q8IUR0 188 aa18.56■□□□□ 0.56
PSPC1-206ENST00000619300 CFAP206Q8IYR0 622 aa18.56■□□□□ 0.56
PSPC1-206ENST00000619300 MTFMTQ96DP5 389 aaKnown RBP18.56■□□□□ 0.56
PSPC1-206ENST00000619300 RSRC1Q96IZ7 334 aaKnown RBP18.56■□□□□ 0.56
PSPC1-206ENST00000619300 PCDHAC1Q9H158 963 aa18.56■□□□□ 0.56
PSPC1-206ENST00000619300 RSPH9Q9H1X1 276 aaPredicted RBP18.56■□□□□ 0.56
PSPC1-206ENST00000619300 ACTL8Q9H568 366 aa18.56■□□□□ 0.56
PSPC1-206ENST00000619300 ABCD2Q9UBJ2 740 aa18.56■□□□□ 0.56
PSPC1-206ENST00000619300 MCM8Q9UJA3 840 aa18.56■□□□□ 0.56
PSPC1-206ENST00000619300 LEF1Q9UJU2 399 aaPredicted RBP18.56■□□□□ 0.56
PSPC1-206ENST00000619300 SNX6Q9UNH7 406 aa18.56■□□□□ 0.56
PSPC1-206ENST00000619300 POLR3HQ9Y535 204 aaPredicted RBP18.56■□□□□ 0.56
PSPC1-206ENST00000619300 H3BM21 787 aa18.55■□□□□ 0.56
PSPC1-206ENST00000619300 DRD3P35462 400 aa18.55■□□□□ 0.56
PSPC1-206ENST00000619300 ATXN3P54252 364 aaPredicted RBP18.55■□□□□ 0.56
PSPC1-206ENST00000619300 RPL38P63173 70 aaKnown RBP18.55■□□□□ 0.56
PSPC1-206ENST00000619300 MRPS22P82650 360 aaKnown RBP18.55■□□□□ 0.56
PSPC1-206ENST00000619300 GTF2H3Q13889 308 aa18.55■□□□□ 0.56
PSPC1-206ENST00000619300 MAP7D1Q3KQU3 841 aa18.55■□□□□ 0.56
PSPC1-206ENST00000619300 CMPK2Q5EBM0 449 aa18.55■□□□□ 0.56
PSPC1-206ENST00000619300 HABP4Q5JVS0 413 aaKnown RBP18.55■□□□□ 0.56
PSPC1-206ENST00000619300 FOXJ1Q92949 421 aa18.55■□□□□ 0.56
PSPC1-206ENST00000619300 LRTM1Q9HBL6 345 aa18.55■□□□□ 0.56
PSPC1-206ENST00000619300 PSMD13Q9UNM6 376 aa18.55■□□□□ 0.56
PSPC1-206ENST00000619300 MYO9BQ13459 2157 aa18.55■□□□□ 0.56
PSPC1-206ENST00000619300 MID1O15344 667 aa18.54■□□□□ 0.56
PSPC1-206ENST00000619300 VEGFDO43915 354 aa18.54■□□□□ 0.56
PSPC1-206ENST00000619300 RNASEH1O60930 286 aaKnown RBP18.54■□□□□ 0.56
PSPC1-206ENST00000619300 SEC22BO75396 215 aa18.54■□□□□ 0.56
PSPC1-206ENST00000619300 PDYNP01213 254 aa18.54■□□□□ 0.56
PSPC1-206ENST00000619300 ATP6V1C1P21283 382 aa18.54■□□□□ 0.56
PSPC1-206ENST00000619300 SLC6A2P23975 617 aa18.54■□□□□ 0.56
PSPC1-206ENST00000619300 SOX9P48436 509 aa18.54■□□□□ 0.56
PSPC1-206ENST00000619300 CAMK2GQ13555 558 aaPredicted RBP18.54■□□□□ 0.56
PSPC1-206ENST00000619300 NFYCQ13952 458 aa18.54■□□□□ 0.56
PSPC1-206ENST00000619300 CST6Q15828 149 aa18.54■□□□□ 0.56
PSPC1-206ENST00000619300 PAGE3Q5JUK9 113 aa18.54■□□□□ 0.56
PSPC1-206ENST00000619300 AGTRAPQ6RW13 159 aa18.54■□□□□ 0.56
PSPC1-206ENST00000619300 SLC15A3Q8IY34 581 aa18.54■□□□□ 0.56
PSPC1-206ENST00000619300 AADATQ8N5Z0 425 aa18.54■□□□□ 0.56
PSPC1-206ENST00000619300 ZNF513Q8N8E2 541 aaPredicted RBP18.54■□□□□ 0.56
PSPC1-206ENST00000619300 SELENOMQ8WWX9 145 aa18.54■□□□□ 0.56
PSPC1-206ENST00000619300 HIC2Q96JB3 615 aa18.54■□□□□ 0.56
PSPC1-206ENST00000619300 LINC00615Q96LM1 132 aaPredicted RBP18.54■□□□□ 0.56
PSPC1-206ENST00000619300 MAGEB10Q96LZ2 347 aaPredicted RBP18.54■□□□□ 0.56
PSPC1-206ENST00000619300 ELOVL6Q9H5J4 265 aa18.54■□□□□ 0.56
PSPC1-206ENST00000619300 STOX2Q9P2F5 926 aaPredicted RBP18.54■□□□□ 0.56
PSPC1-206ENST00000619300 GPR34Q9UPC5 381 aa18.54■□□□□ 0.56
PSPC1-206ENST00000619300 REV3LO60673 3130 aa18.54■□□□□ 0.56
PSPC1-206ENST00000619300 NPC1O15118 1278 aa18.54■□□□□ 0.56
PSPC1-206ENST00000619300 PRAMEF4O60810 478 aa18.54■□□□□ 0.56
PSPC1-206ENST00000619300 ACADSP16219 412 aa18.54■□□□□ 0.56
PSPC1-206ENST00000619300 ZNF8P17098 575 aaPredicted RBP18.54■□□□□ 0.56
PSPC1-206ENST00000619300 JAK1P23458 1154 aa18.54■□□□□ 0.56
PSPC1-206ENST00000619300 TNFRSF4P43489 277 aa18.54■□□□□ 0.56
PSPC1-206ENST00000619300 CAPRIN1Q14444 709 aaKnown RBP18.54■□□□□ 0.56
PSPC1-206ENST00000619300 CCSMST1Q4G0I0 132 aa18.54■□□□□ 0.56
PSPC1-206ENST00000619300 TIGD2Q4W5G0 525 aa18.54■□□□□ 0.56
PSPC1-206ENST00000619300 PRAMEF9Q5VWM5 478 aa18.54■□□□□ 0.56
PSPC1-206ENST00000619300 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.54■□□□□ 0.56
PSPC1-206ENST00000619300 SPATA24Q86W54 205 aa18.54■□□□□ 0.56
PSPC1-206ENST00000619300 ACPTQ9BZG2 426 aa18.54■□□□□ 0.56
PSPC1-206ENST00000619300 INTS7Q9NVH2 962 aaKnown RBP18.54■□□□□ 0.56
PSPC1-206ENST00000619300 C1orf109Q9NX04 203 aa18.54■□□□□ 0.56
PSPC1-206ENST00000619300 C17orf113A0A1B0GUU1 675 aa18.53■□□□□ 0.56
PSPC1-206ENST00000619300 IGLON5A6NGN9 336 aa18.53■□□□□ 0.56
PSPC1-206ENST00000619300 IFRD1O00458 451 aaPredicted RBP18.53■□□□□ 0.56
PSPC1-206ENST00000619300 NME4O00746 187 aa18.53■□□□□ 0.56
PSPC1-206ENST00000619300 AP1G1O43747 822 aa18.53■□□□□ 0.56
PSPC1-206ENST00000619300 POP7O75817 140 aaKnown RBP18.53■□□□□ 0.56
PSPC1-206ENST00000619300 NPPAP01160 153 aa18.53■□□□□ 0.56
PSPC1-206ENST00000619300 CCR3P51677 355 aa18.53■□□□□ 0.56
PSPC1-206ENST00000619300 TAS2R38P59533 333 aa18.53■□□□□ 0.56
PSPC1-206ENST00000619300 CHIT1Q13231 466 aa18.53■□□□□ 0.56
PSPC1-206ENST00000619300 CACHD1Q5VU97 1274 aa18.53■□□□□ 0.56
PSPC1-206ENST00000619300 ADAMTSL4Q6UY14 1074 aa18.53■□□□□ 0.56
PSPC1-206ENST00000619300 THOC6Q86W42 341 aaKnown RBP18.53■□□□□ 0.56
PSPC1-206ENST00000619300 ZNF547Q8IVP9 402 aa18.53■□□□□ 0.56
PSPC1-206ENST00000619300 PLA2G15Q8NCC3 412 aa18.53■□□□□ 0.56
PSPC1-206ENST00000619300 PKP4Q99569 1192 aa18.53■□□□□ 0.56
PSPC1-206ENST00000619300 CMTM6Q9NX76 183 aa18.53■□□□□ 0.56
PSPC1-206ENST00000619300 ASIC5Q9NY37 505 aa18.53■□□□□ 0.56
PSPC1-206ENST00000619300 C6orf203Q9P0P8 240 aaPredicted RBP18.53■□□□□ 0.56
PSPC1-206ENST00000619300 GRXCR2A6NFK2 248 aa18.52■□□□□ 0.56
PSPC1-206ENST00000619300 K7EQS6 105 aa18.52■□□□□ 0.56
PSPC1-206ENST00000619300 UGDHO60701 494 aa18.52■□□□□ 0.56
PSPC1-206ENST00000619300 RSL1D1O76021 490 aaKnown RBP18.52■□□□□ 0.56
PSPC1-206ENST00000619300 C1orf105O95561 183 aa18.52■□□□□ 0.56
PSPC1-206ENST00000619300 ADH1BP00325 375 aa18.52■□□□□ 0.56
PSPC1-206ENST00000619300 C5AR1P21730 350 aa18.52■□□□□ 0.56
PSPC1-206ENST00000619300 HALP42357 657 aa18.52■□□□□ 0.56
PSPC1-206ENST00000619300 MTHFRP42898 656 aa18.52■□□□□ 0.56
PSPC1-206ENST00000619300 BDKRB1P46663 353 aa18.52■□□□□ 0.56
PSPC1-206ENST00000619300 NEK2P51955 445 aa18.52■□□□□ 0.56
PSPC1-206ENST00000619300 PLOD1Q02809 727 aaPredicted RBP18.52■□□□□ 0.56
PSPC1-206ENST00000619300 NAE1Q13564 534 aa18.52■□□□□ 0.56
PSPC1-206ENST00000619300 SPATS1Q496A3 300 aa18.52■□□□□ 0.56
PSPC1-206ENST00000619300 SLC44A4Q53GD3 710 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms