RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 HSCBQ8IWL3 235 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 KLHDC8BQ8IXV7 354 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 TBC1D21Q8IYX1 336 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 CLYBLQ8N0X4 340 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 M1APQ8TC57 530 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 CNDP1Q96KN2 507 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 IMMP1LQ96LU5 166 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 TLR10Q9BXR5 811 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 MRPL47Q9HD33 250 aaKnown RBP4.38□□□□□ -1.71
SNCA-213ENST00000618500 TAS2R14Q9NYV8 317 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 ICKQ9UPZ9 632 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 CDYLQ9Y232 598 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 NEU2Q9Y3R4 380 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 FAM169AQ9Y6X4 670 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 TRBV5-4A0A0C4DH59 114 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 UGT1A9O60656 530 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 SRPX2O60687 465 aaPredicted RBP4.38□□□□□ -1.71
SNCA-213ENST00000618500 AP2A1O95782 977 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 POLR2CP19387 275 aaPredicted RBP4.38□□□□□ -1.71
SNCA-213ENST00000618500 MEOX1P50221 254 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 RAB28P51157 221 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 MAXP61244 160 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 RAPSNQ13702 412 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 NFE2L1Q14494 772 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 PTPRRQ15256 657 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 LONRF2Q1L5Z9 754 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 ATP13A5Q4VNC0 1218 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 DCUN1D2Q6PH85 259 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 FGD2Q7Z6J4 655 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 DOLPP1Q86YN1 238 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 TRAPPC5Q8IUR0 188 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 GPALPP1Q8IXQ4 340 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 HORMAD2Q8N7B1 307 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 TMEM178AQ8NBL3 297 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 CATSPER1Q8NEC5 780 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 LCN9Q8WX39 176 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 HDAC10Q969S8 669 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 SLC22A18Q96BI1 424 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 FICDQ9BVA6 458 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 SPRTNQ9H040 489 aaPredicted RBP4.38□□□□□ -1.71
SNCA-213ENST00000618500 TP63Q9H3D4 680 aaPredicted RBP4.38□□□□□ -1.71
SNCA-213ENST00000618500 VPS37BQ9H9H4 285 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 ZNF358Q9NW07 568 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 EURLQ9NYK6 297 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 IL17CQ9P0M4 197 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 DHCR7Q9UBM7 475 aaKnown RBP4.38□□□□□ -1.71
SNCA-213ENST00000618500 FOXD3Q9UJU5 478 aaPredicted RBP4.38□□□□□ -1.71
SNCA-213ENST00000618500 PCDHGB3Q9Y5G1 929 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 F8P00451 2351 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 FAM237BA0A1B0GVD1 139 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 TTC24A2A3L6 582 aaPredicted RBP4.37□□□□□ -1.71
SNCA-213ENST00000618500 TTI1O43156 1089 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 MFSD11O43934 449 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 NME2P1O60361 137 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 WFS1O76024 890 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 GFPT2O94808 682 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 CHRM5P08912 532 aaPredicted RBP4.37□□□□□ -1.71
SNCA-213ENST00000618500 NME2P22392 152 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 PKLRP30613 574 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 THBS2P35442 1172 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 DRG2P55039 364 aaKnown RBP4.37□□□□□ -1.71
SNCA-213ENST00000618500 PKP1Q13835 747 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 ZIC1Q15915 447 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 DEFB113Q30KQ7 82 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 C2CD6Q53TS8 623 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 ZNF766Q5HY98 468 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 GARNL3Q5VVW2 1013 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 PLAG1Q6DJT9 500 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 PACS1Q6VY07 963 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 ARHGEF39Q8N4T4 335 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 OR52E1Q8NGJ3 308 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 SLC30A5Q8TAD4 765 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 RMND5BQ96G75 393 aaPredicted RBP4.37□□□□□ -1.71
SNCA-213ENST00000618500 RAB11FIP5Q9BXF6 653 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 COG4Q9H9E3 785 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 IL26Q9NPH9 171 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 RASSF1Q9NS23 344 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 ETNK2Q9NVF9 386 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 RBM22Q9NW64 420 aaKnown RBP eCLIP4.37□□□□□ -1.71
SNCA-213ENST00000618500 TEKT2Q9UIF3 430 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 NSG1A0A0A6YYJ2 146 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 GLYATL1P3A0A0U1RQE8 302 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 A0A1B0GVC2 190 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 PRRG2O14669 202 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 LIN7AO14910 233 aaPredicted RBP4.37□□□□□ -1.71
SNCA-213ENST00000618500 LDB2O43679 373 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 DIAPH2O60879 1101 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 S1PR4O95977 384 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 AMPD1P23109 780 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 RPL10P27635 214 aaKnown RBP4.37□□□□□ -1.71
SNCA-213ENST00000618500 PRKCIP41743 596 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 NSG1P42857 185 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 ALDH6A1Q02252 535 aaKnown RBP4.37□□□□□ -1.71
SNCA-213ENST00000618500 EXT1Q16394 746 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 FAM214AQ32MH5 1076 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 DNAJC21Q5F1R6 531 aaKnown RBP4.37□□□□□ -1.71
SNCA-213ENST00000618500 TCP11X2Q5H9J9 407 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 ZNF648Q5T619 568 aaPredicted RBP4.37□□□□□ -1.71
SNCA-213ENST00000618500 GPRC6AQ5T6X5 926 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 CDKAL1Q5VV42 579 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms