RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 OTOAQ7RTW8 1153 aa24.35■■□□□ 1.49
VEGFA-228ENST00000617771 RUFY1Q96T51 708 aa24.35■■□□□ 1.49
VEGFA-228ENST00000617771 SAMD15Q9P1V8 674 aa24.35■■□□□ 1.49
VEGFA-228ENST00000617771 MAN2B2Q9Y2E5 1009 aa24.35■■□□□ 1.49
VEGFA-228ENST00000617771 RAB40ALP0C0E4 278 aa24.34■■□□□ 1.49
VEGFA-228ENST00000617771 RORAP35398 523 aa24.34■■□□□ 1.49
VEGFA-228ENST00000617771 COILP38432 576 aaPredicted RBP24.34■■□□□ 1.49
VEGFA-228ENST00000617771 EIF3BP55884 814 aaKnown RBP24.34■■□□□ 1.49
VEGFA-228ENST00000617771 RPS18P62269 152 aaKnown RBP24.34■■□□□ 1.49
VEGFA-228ENST00000617771 CYP1B1Q16678 543 aa24.34■■□□□ 1.49
VEGFA-228ENST00000617771 CASC4Q6P4E1 433 aa24.34■■□□□ 1.49
VEGFA-228ENST00000617771 CCDC137Q6PK04 289 aaKnown RBP24.34■■□□□ 1.49
VEGFA-228ENST00000617771 FLVCR1-AS1Q8TAF5 88 aa24.34■■□□□ 1.49
VEGFA-228ENST00000617771 THAP4Q8WY91 577 aa24.34■■□□□ 1.49
VEGFA-228ENST00000617771 SLC22A18Q96BI1 424 aa24.34■■□□□ 1.49
VEGFA-228ENST00000617771 ABHD17AQ96GS6 310 aa24.34■■□□□ 1.49
VEGFA-228ENST00000617771 TCF12Q99081 682 aa24.34■■□□□ 1.49
VEGFA-228ENST00000617771 PCMTD2Q9NV79 361 aa24.34■■□□□ 1.49
VEGFA-228ENST00000617771 MRFAP1Q9Y605 127 aa24.34■■□□□ 1.49
VEGFA-228ENST00000617771 GCN1Q92616 2671 aaKnown RBP24.34■■□□□ 1.49
VEGFA-228ENST00000617771 H3BMM5 538 aa24.33■■□□□ 1.49
VEGFA-228ENST00000617771 AVILO75366 819 aa24.33■■□□□ 1.49
VEGFA-228ENST00000617771 MLNP12872 115 aa24.33■■□□□ 1.49
VEGFA-228ENST00000617771 TYSND1Q2T9J0 566 aa24.33■■□□□ 1.49
VEGFA-228ENST00000617771 ANKRD22Q5VYY1 191 aa24.33■■□□□ 1.49
VEGFA-228ENST00000617771 TMEM135Q86UB9 458 aa24.33■■□□□ 1.49
VEGFA-228ENST00000617771 PTRH1Q86Y79 214 aaKnown RBP24.33■■□□□ 1.49
VEGFA-228ENST00000617771 REXO1L1PQ8IX06 675 aa24.33■■□□□ 1.49
VEGFA-228ENST00000617771 SYTL1Q8IYJ3 562 aa24.33■■□□□ 1.49
VEGFA-228ENST00000617771 SLC35F6Q8N357 371 aa24.33■■□□□ 1.49
VEGFA-228ENST00000617771 SKA2Q8WVK7 121 aaPredicted RBP24.33■■□□□ 1.49
VEGFA-228ENST00000617771 DPH2Q9BQC3 489 aaPredicted RBP24.33■■□□□ 1.49
VEGFA-228ENST00000617771 NLNQ9BYT8 704 aa24.33■■□□□ 1.49
VEGFA-228ENST00000617771 XAB2Q9HCS7 855 aaKnown RBP24.33■■□□□ 1.49
VEGFA-228ENST00000617771 FAM60AQ9NP50 221 aa24.33■■□□□ 1.49
VEGFA-228ENST00000617771 AP1M2Q9Y6Q5 423 aa24.33■■□□□ 1.49
VEGFA-228ENST00000617771 GOLGA6L10A0A0M3HER8 536 aa24.32■■□□□ 1.48
VEGFA-228ENST00000617771 GOLGA8KD6RF30 607 aa24.32■■□□□ 1.48
VEGFA-228ENST00000617771 MKRN2OSH3BPM6 223 aa24.32■■□□□ 1.48
VEGFA-228ENST00000617771 GOLGA8TH3BQL2 631 aa24.32■■□□□ 1.48
VEGFA-228ENST00000617771 ZNF749O43361 778 aa24.32■■□□□ 1.48
VEGFA-228ENST00000617771 RFPL1O75677 317 aa24.32■■□□□ 1.48
VEGFA-228ENST00000617771 OGNP20774 298 aaKnown RBP24.32■■□□□ 1.48
VEGFA-228ENST00000617771 PEBP1P30086 187 aaKnown RBP24.32■■□□□ 1.48
VEGFA-228ENST00000617771 PMS2P54278 862 aa24.32■■□□□ 1.48
VEGFA-228ENST00000617771 ZIC1Q15915 447 aa24.32■■□□□ 1.48
VEGFA-228ENST00000617771 LACTB2Q53H82 288 aaPredicted RBP24.32■■□□□ 1.48
VEGFA-228ENST00000617771 CTSL3PQ5NE16 218 aa24.32■■□□□ 1.48
VEGFA-228ENST00000617771 CAND1Q86VP6 1230 aaKnown RBP24.32■■□□□ 1.48
VEGFA-228ENST00000617771 MCUQ8NE86 351 aa24.32■■□□□ 1.48
VEGFA-228ENST00000617771 ACTRT1Q8TDG2 376 aa24.32■■□□□ 1.48
VEGFA-228ENST00000617771 GRK7Q8WTQ7 553 aa24.32■■□□□ 1.48
VEGFA-228ENST00000617771 LPGAT1Q92604 370 aa24.32■■□□□ 1.48
VEGFA-228ENST00000617771 FOPNLQ96NB1 174 aa24.32■■□□□ 1.48
VEGFA-228ENST00000617771 OSBPL9Q96SU4 736 aa24.32■■□□□ 1.48
VEGFA-228ENST00000617771 RAB11FIP5Q9BXF6 653 aa24.32■■□□□ 1.48
VEGFA-228ENST00000617771 ZNF71Q9NQZ8 489 aaPredicted RBP24.32■■□□□ 1.48
VEGFA-228ENST00000617771 SLC39A10Q9ULF5 831 aa24.32■■□□□ 1.48
VEGFA-228ENST00000617771 SNX7Q9UNH6 387 aa24.32■■□□□ 1.48
VEGFA-228ENST00000617771 VPS9D1Q9Y2B5 631 aa24.32■■□□□ 1.48
VEGFA-228ENST00000617771 BOD1L1Q8NFC6 3051 aa24.32■■□□□ 1.48
VEGFA-228ENST00000617771 MAGEB16A2A368 324 aa24.31■■□□□ 1.48
VEGFA-228ENST00000617771 RASGRF2O14827 1237 aa24.31■■□□□ 1.48
VEGFA-228ENST00000617771 KIF5CO60282 957 aa24.31■■□□□ 1.48
VEGFA-228ENST00000617771 OR2B3O76000 313 aa24.31■■□□□ 1.48
VEGFA-228ENST00000617771 TMEM63AO94886 807 aa24.31■■□□□ 1.48
VEGFA-228ENST00000617771 ESR1P03372 595 aa24.31■■□□□ 1.48
VEGFA-228ENST00000617771 AGXTP21549 392 aa24.31■■□□□ 1.48
VEGFA-228ENST00000617771 CD9P21926 228 aa24.31■■□□□ 1.48
VEGFA-228ENST00000617771 FMO4P31512 558 aa24.31■■□□□ 1.48
VEGFA-228ENST00000617771 ADARP55265 1226 aaKnown RBP24.31■■□□□ 1.48
VEGFA-228ENST00000617771 DEFB110Q30KQ9 67 aa24.31■■□□□ 1.48
VEGFA-228ENST00000617771 LCN10Q6JVE6 187 aa24.31■■□□□ 1.48
VEGFA-228ENST00000617771 APLFQ8IW19 511 aaPredicted RBP24.31■■□□□ 1.48
VEGFA-228ENST00000617771 RAB42Q8N4Z0 105 aa24.31■■□□□ 1.48
VEGFA-228ENST00000617771 ENDOVQ8N8Q3 282 aaKnown RBP24.31■■□□□ 1.48
VEGFA-228ENST00000617771 OR2L8Q8NGY9 312 aa24.31■■□□□ 1.48
VEGFA-228ENST00000617771 BIRC8Q96P09 236 aa24.31■■□□□ 1.48
VEGFA-228ENST00000617771 MENTQ9BUN1 341 aa24.31■■□□□ 1.48
VEGFA-228ENST00000617771 FAM237BA0A1B0GVD1 139 aa24.3■■□□□ 1.48
VEGFA-228ENST00000617771 SDR42E2A6NKP2 422 aa24.3■■□□□ 1.48
VEGFA-228ENST00000617771 C9J4A7 227 aa24.3■■□□□ 1.48
VEGFA-228ENST00000617771 PHF2O75151 1096 aa24.3■■□□□ 1.48
VEGFA-228ENST00000617771 S1PR4O95977 384 aa24.3■■□□□ 1.48
VEGFA-228ENST00000617771 IL10RAQ13651 578 aa24.3■■□□□ 1.48
VEGFA-228ENST00000617771 GRB7Q14451 532 aa24.3■■□□□ 1.48
VEGFA-228ENST00000617771 LINC01555Q8NAE3 123 aa24.3■■□□□ 1.48
VEGFA-228ENST00000617771 COG1Q8WTW3 980 aa24.3■■□□□ 1.48
VEGFA-228ENST00000617771 RAD51AP1Q96B01 352 aa24.3■■□□□ 1.48
VEGFA-228ENST00000617771 INTS7Q9NVH2 962 aaKnown RBP24.3■■□□□ 1.48
VEGFA-228ENST00000617771 CIDEBQ9UHD4 219 aa24.3■■□□□ 1.48
VEGFA-228ENST00000617771 NEU2Q9Y3R4 380 aa24.3■■□□□ 1.48
VEGFA-228ENST00000617771 CES2O00748 559 aa24.29■■□□□ 1.48
VEGFA-228ENST00000617771 C1orf105O95561 183 aa24.29■■□□□ 1.48
VEGFA-228ENST00000617771 CCNFP41002 786 aa24.29■■□□□ 1.48
VEGFA-228ENST00000617771 GABRA4P48169 554 aa24.29■■□□□ 1.48
VEGFA-228ENST00000617771 FNTAP49354 379 aa24.29■■□□□ 1.48
VEGFA-228ENST00000617771 DHX34Q14147 1143 aaKnown RBP24.29■■□□□ 1.48
VEGFA-228ENST00000617771 PTCHD3Q3KNS1 767 aa24.29■■□□□ 1.48
VEGFA-228ENST00000617771 NEPROQ6NW34 567 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms