RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 SIRPGQ9P1W8 387 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 TBC1D29Q9UFV1 150 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 APOBEC3BQ9UH17 382 aaKnown RBP7.83□□□□□ -1.16
PCDH9-205ENST00000614931 RNF112Q9ULX5 631 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 OARD1Q9Y530 152 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 ASB1Q9Y576 335 aa7.83□□□□□ -1.16
PCDH9-205ENST00000614931 CFAP20Q9Y6A4 193 aaKnown RBP7.83□□□□□ -1.16
PCDH9-205ENST00000614931 PTPRBP23467 1997 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 KMT2BQ9UMN6 2715 aaPredicted RBP7.82□□□□□ -1.16
PCDH9-205ENST00000614931 OR52A4PA6NMU1 304 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 PDZK1P1A8MUH7 402 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 TAPBPO15533 448 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 KLK8O60259 260 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 SNX2O60749 519 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 SDC3O75056 442 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 SIX3O95343 332 aaPredicted RBP7.82□□□□□ -1.16
PCDH9-205ENST00000614931 C1orf105O95561 183 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 GUCA1CO95843 209 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 CAPNS1P04632 268 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 C8GP07360 202 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 RBP1P09455 135 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 MYL2P10916 166 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 EPHA8P29322 1005 aaPredicted RBP7.82□□□□□ -1.16
PCDH9-205ENST00000614931 KPNA2P52292 529 aaKnown RBP7.82□□□□□ -1.16
PCDH9-205ENST00000614931 RP1P56715 2156 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 BNIP3Q12983 259 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 SP140Q13342 867 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 TGFBIQ15582 683 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 CHI3L2Q15782 390 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 RPE65Q16518 533 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 PRRT3Q5FWE3 981 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 TMPRSS7Q7RTY8 843 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 GATAD2AQ86YP4 633 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 GPSM1Q86YR5 675 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 PTGR2Q8N8N7 351 aaPredicted RBP7.82□□□□□ -1.16
PCDH9-205ENST00000614931 CCDC63Q8NA47 563 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 PDPRQ8NCN5 879 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 OR6Y1Q8NGX8 325 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 STAG3L4Q8TBR4 150 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 RDH11Q8TC12 318 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 SKA2Q8WVK7 121 aaPredicted RBP7.82□□□□□ -1.16
PCDH9-205ENST00000614931 ESAMQ96AP7 390 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 C12orf66Q96MD2 445 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 TMEM237Q96Q45 408 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 GATA5Q9BWX5 397 aaPredicted RBP7.82□□□□□ -1.16
PCDH9-205ENST00000614931 SLC12A9Q9BXP2 914 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 ZNF395Q9H8N7 513 aaPredicted RBP7.82□□□□□ -1.16
PCDH9-205ENST00000614931 RDH14Q9HBH5 336 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 UCKL1Q9NWZ5 548 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 NUDT4Q9NZJ9 180 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 NCKIPSDQ9NZQ3 722 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 CD274Q9NZQ7 290 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 TAAR2Q9P1P5 351 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 PLAGL1Q9UM63 463 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 ASXL3Q9C0F0 2248 aa7.82□□□□□ -1.16
PCDH9-205ENST00000614931 MDC1Q14676 2089 aaKnown RBP7.82□□□□□ -1.16
PCDH9-205ENST00000614931 TRBV23OR9-2A0A075B6M9 112 aa7.81□□□□□ -1.16
PCDH9-205ENST00000614931 KLHL33A6NCF5 533 aa7.81□□□□□ -1.16
PCDH9-205ENST00000614931 SLC16A5O15375 505 aa7.81□□□□□ -1.16
PCDH9-205ENST00000614931 BIRC5O15392 142 aa7.81□□□□□ -1.16
PCDH9-205ENST00000614931 FFAR2O15552 330 aa7.81□□□□□ -1.16
PCDH9-205ENST00000614931 ITM2AO43736 263 aa7.81□□□□□ -1.16
PCDH9-205ENST00000614931 KCNJ13O60928 360 aa7.81□□□□□ -1.16
PCDH9-205ENST00000614931 LYPLA1O75608 230 aaPredicted RBP7.81□□□□□ -1.16
PCDH9-205ENST00000614931 PIAS2O75928 621 aa7.81□□□□□ -1.16
PCDH9-205ENST00000614931 CATP04040 527 aaKnown RBP7.81□□□□□ -1.16
PCDH9-205ENST00000614931 SLC35G4P0C7Q5 338 aa7.81□□□□□ -1.16
PCDH9-205ENST00000614931 MTHFD1P11586 935 aaKnown RBP7.81□□□□□ -1.16
PCDH9-205ENST00000614931 TAC1P20366 129 aa7.81□□□□□ -1.16
PCDH9-205ENST00000614931 IDSP22304 550 aa7.81□□□□□ -1.16
PCDH9-205ENST00000614931 ATP5F1P24539 256 aaPredicted RBP7.81□□□□□ -1.16
PCDH9-205ENST00000614931 PRKAA2P54646 552 aa7.81□□□□□ -1.16
PCDH9-205ENST00000614931 CDKL1Q00532 357 aa7.81□□□□□ -1.16
PCDH9-205ENST00000614931 NFKB2Q00653 900 aa7.81□□□□□ -1.16
PCDH9-205ENST00000614931 PLOD1Q02809 727 aaPredicted RBP7.81□□□□□ -1.16
PCDH9-205ENST00000614931 ILF3Q12906 894 aaKnown RBP eCLIP7.81□□□□□ -1.16
PCDH9-205ENST00000614931 LRP8Q14114 963 aa7.81□□□□□ -1.16
PCDH9-205ENST00000614931 SETDB1Q15047 1291 aa7.81□□□□□ -1.16
PCDH9-205ENST00000614931 PDK4Q16654 411 aa7.81□□□□□ -1.16
PCDH9-205ENST00000614931 PFKFB4Q16877 469 aa7.81□□□□□ -1.16
PCDH9-205ENST00000614931 UNC50Q53HI1 259 aa7.81□□□□□ -1.16
PCDH9-205ENST00000614931 ABRAXAS1Q6UWZ7 409 aa7.81□□□□□ -1.16
PCDH9-205ENST00000614931 UNC5DQ6UXZ4 953 aa7.81□□□□□ -1.16
PCDH9-205ENST00000614931 WASH2PQ6VEQ5 465 aa7.81□□□□□ -1.16
PCDH9-205ENST00000614931 FRA10AC1Q70Z53 315 aa7.81□□□□□ -1.16
PCDH9-205ENST00000614931 MTERF4Q7Z6M4 381 aaKnown RBP7.81□□□□□ -1.16
PCDH9-205ENST00000614931 TAF8Q7Z7C8 310 aa7.81□□□□□ -1.16
PCDH9-205ENST00000614931 TAX1BP1Q86VP1 789 aa7.81□□□□□ -1.16
PCDH9-205ENST00000614931 NAGSQ8N159 534 aa7.81□□□□□ -1.16
PCDH9-205ENST00000614931 FBXO39Q8N4B4 442 aa7.81□□□□□ -1.16
PCDH9-205ENST00000614931 EID2Q8N6I1 236 aa7.81□□□□□ -1.16
PCDH9-205ENST00000614931 ZNF548Q8NEK5 533 aaPredicted RBP7.81□□□□□ -1.16
PCDH9-205ENST00000614931 LMX1AQ8TE12 382 aa7.81□□□□□ -1.16
PCDH9-205ENST00000614931 UBTD2Q8WUN7 234 aa7.81□□□□□ -1.16
PCDH9-205ENST00000614931 JPH3Q8WXH2 748 aaPredicted RBP7.81□□□□□ -1.16
PCDH9-205ENST00000614931 ZNF75CPQ92670 426 aaPredicted RBP7.81□□□□□ -1.16
PCDH9-205ENST00000614931 TFGQ92734 400 aaPredicted RBP7.81□□□□□ -1.16
PCDH9-205ENST00000614931 RHBDF1Q96CC6 855 aa7.81□□□□□ -1.16
PCDH9-205ENST00000614931 PHF21BQ96EK2 531 aa7.81□□□□□ -1.16
PCDH9-205ENST00000614931 NSUN5Q96P11 429 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms